RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 MS4A15Q8N5U1 240 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 UXS1Q8NBZ7 420 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 OR10J5Q8NHC4 309 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 OSR1Q8TAX0 266 aaPredicted RBP12.48□□□□□ -0.41
USE1-208ENST00000600970 FBXL7Q9UJT9 491 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 KIAA1109Q2LD37 5005 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
USE1-208ENST00000600970 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 ZNF320A2RRD8 509 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 A8MWP6 167 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 GSTT2P0CG29 244 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 GSTT2BP0CG30 244 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 ATF4P18848 351 aaPredicted RBP12.47□□□□□ -0.41
USE1-208ENST00000600970 ARL3P36405 182 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 CDK10Q15131 360 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 HSD17B12Q53GQ0 312 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 CLEC19AQ6UXS0 136 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 MMD2Q8IY49 270 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 CYGBQ8WWM9 190 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 ADTRPQ96IZ2 230 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 CCDC140Q96MF4 163 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 PSORS1C1Q9UIG5 152 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 ZNF257Q9Y2Q1 563 aa12.47□□□□□ -0.41
USE1-208ENST00000600970 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
USE1-208ENST00000600970 CREBL2O60519 120 aaPredicted RBP12.46□□□□□ -0.41
USE1-208ENST00000600970 MAP2K4P45985 399 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 FAM106AQ4KMX7 169 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 LAIR2Q6ISS4 152 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 AHSA2Q719I0 299 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 C10orf67Q8IYJ2 551 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 GFI1Q99684 422 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 PLGRKTQ9HBL7 147 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 S4R3C0 116 aa12.46□□□□□ -0.41
USE1-208ENST00000600970 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 SLC17A2O00624 439 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 FCGR3AP08637 254 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 UCHL1P09936 223 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 APOC4P55056 127 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 OR4A47Q6IF82 309 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 OR56B1Q8NGI3 324 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 PHLDA1Q8WV24 401 aaPredicted RBP12.45□□□□□ -0.42
USE1-208ENST00000600970 FANCD2OSQ96PS1 177 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 KCNK7Q9Y2U2 307 aa12.45□□□□□ -0.42
USE1-208ENST00000600970 TRAV25A0A0B4J276 109 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 NPIPB5A8MRT5 1133 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 UBE2CO00762 179 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 DIRAS3O95661 229 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 OR1L6Q8NGR2 347 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 GATAD1Q8WUU5 269 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 MAFIPQ8WZ33 124 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 RNF183Q96D59 192 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 DCUN1D5Q9BTE7 237 aa12.44□□□□□ -0.42
USE1-208ENST00000600970 E7EUB6 86 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 CDK1P06493 297 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
USE1-208ENST00000600970 C8orf88P0DMB2 117 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 CLDN12P56749 244 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 MRPS15P82914 257 aaKnown RBP12.43□□□□□ -0.42
USE1-208ENST00000600970 RBPMS2Q6ZRY4 209 aaKnown RBP12.43□□□□□ -0.42
USE1-208ENST00000600970 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 TMEM217Q8N7C4 229 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 GINS4Q9BRT9 223 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 PLCXD1Q9NUJ7 323 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 UBQLN2Q9UHD9 624 aa12.43□□□□□ -0.42
USE1-208ENST00000600970 AK6Q9Y3D8 172 aaKnown RBP12.43□□□□□ -0.42
USE1-208ENST00000600970 DPPA5A6NC42 116 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 FCGR3BO75015 233 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 PLA2G7Q13093 441 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 RAB11BQ15907 218 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 C2orf76Q3KRA6 126 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 ZNF585BQ52M93 769 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 UNQ9165/PRO28630Q6UXU0 137 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 DHRSXQ8N5I4 330 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 FYTTD1Q96QD9 318 aaKnown RBP12.42□□□□□ -0.42
USE1-208ENST00000600970 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 SLC2A9Q9NRM0 540 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 FKBP14Q9NWM8 211 aa12.42□□□□□ -0.42
USE1-208ENST00000600970 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 A0A1B0GW64 132 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 DENRO43583 198 aaKnown RBP12.41□□□□□ -0.42
USE1-208ENST00000600970 CRYGCP07315 174 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 ZNF735P0CB33 412 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 RPL27AP46776 148 aaKnown RBP12.41□□□□□ -0.42
USE1-208ENST00000600970 KLK9Q2XQG4 91 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 H1FOOQ8IZA3 346 aaPredicted RBP12.41□□□□□ -0.42
USE1-208ENST00000600970 SLC38A6Q8IZM9 456 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 BPIFB6Q8NFQ5 453 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 MARC2Q969Z3 335 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
USE1-208ENST00000600970 MND1Q9BWT6 205 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms