RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 KIAA0141Q14154 515 aaPredicted RBP12.61□□□□□ -0.39
LSM4-206ENST00000600289 FXYD3Q14802 87 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 ECSCRQ19T08 205 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 VAX1Q5SQQ9 334 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 ZNF818PQ6ZRF7 136 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 C18orf65Q6ZTR6 163 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 LAX1Q8IWV1 398 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 LINC00482Q8N8I6 264 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 OR6F1Q8NGZ6 308 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 C4orf3Q8WVX3 66 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 TMEM68Q96MH6 324 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 P2RX4Q99571 388 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 ZNF2Q9BSG1 426 aaPredicted RBP12.61□□□□□ -0.39
LSM4-206ENST00000600289 SLIRPQ9GZT3 109 aaKnown RBP12.61□□□□□ -0.39
LSM4-206ENST00000600289 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
LSM4-206ENST00000600289 FXYD6Q9H0Q3 95 aa12.61□□□□□ -0.39
LSM4-206ENST00000600289 A0A1W2PN81 502 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 NUDT19A8MXV4 375 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 CTDSP2O14595 271 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 RGS5O15539 181 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 BRI3O95415 125 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 SAA1P0DJI8 122 aaPredicted RBP12.6□□□□□ -0.39
LSM4-206ENST00000600289 HLA-DMAP28067 261 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 GNRHRP30968 328 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 CHRNA7P36544 502 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 RAB9AP51151 201 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 SSBP1Q04837 148 aaKnown RBP12.6□□□□□ -0.39
LSM4-206ENST00000600289 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 PRSS8Q16651 343 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 LCNL1Q6ZST4 164 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 TMEM17Q86X19 198 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 ZNF491Q8N8L2 437 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 LFNGQ8NES3 379 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 VSTM2AQ8TAG5 236 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 ABHD1Q96SE0 405 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 RBM38Q9H0Z9 239 aaKnown RBP12.6□□□□□ -0.39
LSM4-206ENST00000600289 MTFP1Q9UDX5 166 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 RYR2Q92736 4967 aa12.6□□□□□ -0.39
LSM4-206ENST00000600289 H3BUA1 57 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 ZNF701M0R085 212 aaPredicted RBP12.59□□□□□ -0.39
LSM4-206ENST00000600289 DUS4LO95620 317 aaKnown RBP12.59□□□□□ -0.39
LSM4-206ENST00000600289 CD33P20138 364 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 TBPP20226 339 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 FHL3Q13643 280 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 OR2B11Q5JQS5 317 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 UNQ5815/PRO19632Q6UWF5 114 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
LSM4-206ENST00000600289 MMD2Q8IY49 270 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
LSM4-206ENST00000600289 OR52I2Q8NH67 350 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 ABHD5Q8WTS1 349 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
LSM4-206ENST00000600289 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 DCUN1D5Q9BTE7 237 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 FAM103A1Q9BTL3 118 aaKnown RBP12.59□□□□□ -0.39
LSM4-206ENST00000600289 KLK15Q9H2R5 256 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 SLA2Q9H6Q3 261 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 VSIG4Q9Y279 399 aa12.59□□□□□ -0.39
LSM4-206ENST00000600289 TNCP24821 2201 aa12.58□□□□□ -0.39
LSM4-206ENST00000600289 G3V4G9 280 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 GABARAPH6UMI1 98 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 CTDSPLO15194 276 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 TNFSF12O43508 249 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 KBTBD11O94819 623 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 CNIH1O95406 144 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 HRASP01112 189 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 UCP3P55916 312 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 POU2AF1Q16633 256 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 LPCAT3Q6P1A2 487 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 SPAG16Q8N0X2 631 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 GRPEL2Q8TAA5 225 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 CD300LFQ8TDQ1 290 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
LSM4-206ENST00000600289 KLK11Q9UBX7 282 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 A3GALT2U3KPV4 340 aa12.58□□□□□ -0.4
LSM4-206ENST00000600289 I3L521 148 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 CCL24O00175 119 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 GPR31O00270 319 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 OR2A4O95047 310 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 HPRT1P00492 218 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 FGF2P09038 288 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 MAS1LP35410 378 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 TAS2R31P59538 309 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 TSPAN5P62079 268 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 GNB1P62873 340 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 ASPHD1Q5U4P2 390 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 IDO2Q6ZQW0 420 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 ARRDC1Q8N5I2 433 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 FCAMRQ8WWV6 532 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 RHOVQ96L33 236 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 OR2A7Q96R45 310 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 GPHA2Q96T91 129 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 PLEKHA2Q9HB19 425 aa12.57□□□□□ -0.4
LSM4-206ENST00000600289 RAMP3O60896 148 aa12.56□□□□□ -0.4
LSM4-206ENST00000600289 CD74P04233 296 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms