RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 EGR2P11161 476 aaPredicted RBP14.48□□□□□ -0.09
PNKP-213ENST00000599543 HLA-DMAP28067 261 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 FCGR2CP31995 323 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 RFX2P48378 723 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 SLURP1P55000 103 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 PSG5Q15238 335 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 AKIRIN2Q53H80 203 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 ZNF562Q6V9R5 426 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 DLX4Q92988 240 aaPredicted RBP14.48□□□□□ -0.09
PNKP-213ENST00000599543 ABHD1Q96SE0 405 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 GPHA2Q96T91 129 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 TSNAXQ99598 290 aaKnown RBP14.48□□□□□ -0.09
PNKP-213ENST00000599543 ASCL2Q99929 193 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 ANAPC10Q9UM13 185 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 GAB2Q9UQC2 676 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 OR2W1Q9Y3N9 320 aa14.48□□□□□ -0.09
PNKP-213ENST00000599543 IGHV4OR15-8A0A075B7B6 117 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 A0A087WW49 117 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 SPDEFO95238 335 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 DIRAS3O95661 229 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 TPPP2P59282 170 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 FXYD4P59646 89 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 RPS16P62249 146 aaKnown RBP14.47□□□□□ -0.09
PNKP-213ENST00000599543 CDK10Q15131 360 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 PDPNQ86YL7 162 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 LYSMD2Q8IV50 215 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 LFNGQ8NES3 379 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 OR5AP2Q8NGF4 316 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 OR52I2Q8NH67 350 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 ARPC1AQ92747 370 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 EHFQ9NZC4 300 aa14.47□□□□□ -0.09
PNKP-213ENST00000599543 DPPA5A6NC42 116 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 TUSC2O75896 110 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 IGHV3-11P01762 117 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 SECTM1Q8WVN6 248 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 FLYWCH2Q96CP2 140 aaKnown RBP14.46□□□□□ -0.09
PNKP-213ENST00000599543 DIRAS2Q96HU8 199 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 MS4A10Q96PG2 267 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 SLA2Q9H6Q3 261 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 KLK11Q9UBX7 282 aa14.46□□□□□ -0.09
PNKP-213ENST00000599543 SLC25A17O43808 307 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 NAT1P18440 290 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 HRH1P35367 487 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 OR2B11Q5JQS5 317 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 TMEM17Q86X19 198 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.45□□□□□ -0.1
PNKP-213ENST00000599543 OR6Q1Q8NGQ2 317 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 OR5H2Q8NGV7 314 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 GRPEL2Q8TAA5 225 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 CCL28Q9NRJ3 127 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 TPSG1Q9NRR2 321 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 ADAM30Q9UKF2 790 aa14.45□□□□□ -0.1
PNKP-213ENST00000599543 LINC00473A8K010 186 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 M0QYG6 137 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 PPYP01298 95 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 IGLV2-14P01704 120 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 TRGV3P03979 118 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 HSPB1P04792 205 aaKnown RBP14.44□□□□□ -0.1
PNKP-213ENST00000599543 SPNP16150 400 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 TNFSF8P32971 234 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 IL18Q14116 193 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 FXYD3Q14802 87 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 ACSM6Q6P461 480 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 ZNF645Q8N7E2 425 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 BVESQ8NE79 360 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 NXF2Q9GZY0 626 aaKnown RBP14.44□□□□□ -0.1
PNKP-213ENST00000599543 SCPEP1Q9HB40 452 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 ZNF355PQ9NSJ1 428 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 SLC35D1Q9NTN3 355 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 RYR3Q15413 4870 aa14.44□□□□□ -0.1
PNKP-213ENST00000599543 TNFSF12O43508 249 aa14.43□□□□□ -0.1
PNKP-213ENST00000599543 CNIH1O95406 144 aa14.43□□□□□ -0.1
PNKP-213ENST00000599543 RCVRNP35243 200 aa14.43□□□□□ -0.1
PNKP-213ENST00000599543 RPL30P62888 115 aaKnown RBP14.43□□□□□ -0.1
PNKP-213ENST00000599543 CBX3Q13185 183 aa14.43□□□□□ -0.1
PNKP-213ENST00000599543 ZNF2Q9BSG1 426 aaPredicted RBP14.43□□□□□ -0.1
PNKP-213ENST00000599543 SLC5A7Q9GZV3 580 aa14.43□□□□□ -0.1
PNKP-213ENST00000599543 TAS2R8Q9NYW2 309 aa14.43□□□□□ -0.1
PNKP-213ENST00000599543 ARPC1BO15143 372 aaKnown RBP14.42□□□□□ -0.1
PNKP-213ENST00000599543 GP9P14770 177 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 DUTP33316 252 aaKnown RBP14.42□□□□□ -0.1
PNKP-213ENST00000599543 TAS2R46P59540 309 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 HERV-K104P61576 105 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 OVCH2Q7RTZ1 564 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 POC5Q8NA72 575 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 RHOVQ96L33 236 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 OR4C12Q96R67 309 aa14.42□□□□□ -0.1
PNKP-213ENST00000599543 RBMX2Q9Y388 322 aaKnown RBP14.42□□□□□ -0.1
PNKP-213ENST00000599543 C13orf42A0A1B0GVH6 325 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 H3BUA1 57 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 SULT1C2O00338 296 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 LGALS7P47929 136 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 DYRK1AQ13627 763 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 GIMAP1Q8WWP7 306 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 FCAMRQ8WWV6 532 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 HARBI1Q96MB7 349 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 ELOVL1Q9BW60 279 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 TINAGL1Q9GZM7 467 aaPredicted RBP14.41□□□□□ -0.1
PNKP-213ENST00000599543 FXYD6Q9H0Q3 95 aa14.41□□□□□ -0.1
PNKP-213ENST00000599543 HUWE1Q7Z6Z7 4374 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms