RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 Q8N402 240 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 OR5M8Q8NGP6 311 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 DDB2Q92466 427 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 RAB3CQ96E17 227 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 RHOVQ96L33 236 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 MS4A10Q96PG2 267 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 ASCL2Q99929 193 aa8.07□□□□□ -1.12
LIG1-213ENST00000596672 MCRIP2Q9BUT9 160 aaKnown RBP8.07□□□□□ -1.12
LIG1-213ENST00000596672 METTL1Q9UBP6 276 aaKnown RBP8.07□□□□□ -1.12
LIG1-213ENST00000596672 TRAV18A0A075B6X5 111 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 BOLA2-SMG1P6H3BVE0 249 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 BET1O15155 118 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 HSPA12AO43301 675 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 SSX5O60225 188 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 PTTG1O95997 202 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 IGLV2-14P01704 120 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 OR5H8P0DN80 308 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 MC5RP33032 325 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 BRWD1-AS2P59051 145 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 TAS2R20P59543 309 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 PITPNAQ00169 270 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 ZNF616Q08AN1 781 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 TMEM69Q5SWH9 247 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 C9orf66Q5T8R8 295 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 ZNF562Q6V9R5 426 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 H1FOOQ8IZA3 346 aaPredicted RBP8.06□□□□□ -1.12
LIG1-213ENST00000596672 POC5Q8NA72 575 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 OR4A4PQ8NGN8 299 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 DIABLOQ9NR28 239 aa8.06□□□□□ -1.12
LIG1-213ENST00000596672 FOXA2Q9Y261 457 aaPredicted RBP8.06□□□□□ -1.12
LIG1-213ENST00000596672 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 XRCC3O43542 346 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 RBBP9O75884 186 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 TRBV12-3P01733 135 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 HLA-DQB1P01920 261 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 GSTP1P09211 210 aaKnown RBP8.05□□□□□ -1.12
LIG1-213ENST00000596672 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 PTHLHP12272 177 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 RAB6AP20340 208 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 EIF2B2P49770 351 aaKnown RBP8.05□□□□□ -1.12
LIG1-213ENST00000596672 RPS16P62249 146 aaKnown RBP8.05□□□□□ -1.12
LIG1-213ENST00000596672 RPL30P62888 115 aaKnown RBP8.05□□□□□ -1.12
LIG1-213ENST00000596672 AKIRIN2Q53H80 203 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 TRIQKQ629K1 86 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 TMEM65Q6PI78 240 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 UNQ5815/PRO19632Q6UWF5 114 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 IL34Q6ZMJ4 242 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 Q6ZS49 121 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 BVESQ8NE79 360 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 OR5T1Q8NG75 326 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 EDARADDQ8WWZ3 215 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 RNF5Q99942 180 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 THAP7Q9BT49 309 aaPredicted RBP8.05□□□□□ -1.12
LIG1-213ENST00000596672 OR2D2Q9H210 308 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 KIAA1456Q9P272 454 aa8.05□□□□□ -1.12
LIG1-213ENST00000596672 METTL21EPA6NDL7 271 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 ATP6V1G1O75348 118 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 LGALS1P09382 135 aaKnown RBP8.04□□□□□ -1.12
LIG1-213ENST00000596672 SPNP16150 400 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 DUTP33316 252 aaKnown RBP8.04□□□□□ -1.12
LIG1-213ENST00000596672 INPP1P49441 399 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 CD69Q07108 199 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 EIF4EBP1Q13541 118 aaPredicted RBP8.04□□□□□ -1.12
LIG1-213ENST00000596672 FXYD3Q14802 87 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 CDNFQ49AH0 187 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 TMEM177Q53S58 311 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 ACTBL2Q562R1 376 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 ZNF57Q68EA5 555 aaPredicted RBP8.04□□□□□ -1.12
LIG1-213ENST00000596672 PDPNQ86YL7 162 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 OR52I2Q8NH67 350 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 GRPEL2Q8TAA5 225 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 CHAC2Q8WUX2 184 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 NUDCD2Q8WVJ2 157 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 ARPC1AQ92747 370 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 GPHA2Q96T91 129 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 GPR61Q9BZJ8 451 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.04□□□□□ -1.12
LIG1-213ENST00000596672 SLC35D1Q9NTN3 355 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 RABL2AQ9UBK7 228 aaPredicted RBP8.04□□□□□ -1.12
LIG1-213ENST00000596672 ZNF221Q9UK13 617 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 TBC1D24Q9ULP9 559 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 RABL2BQ9UNT1 228 aa8.04□□□□□ -1.12
LIG1-213ENST00000596672 HYDINQ4G0P3 5121 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
LIG1-213ENST00000596672 A0A1B0GW64 132 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 TMEM235A6NFC5 223 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 LINC01619G3V211 115 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 OVOL1O14753 267 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 CTDSPLO15194 276 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 PLA2G10O15496 165 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 GSTZ1O43708 216 aaPredicted RBP8.03□□□□□ -1.12
LIG1-213ENST00000596672 RAMP3O60896 148 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 SPDEFO95238 335 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 OR8U8P0C7N1 319 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 APELAP0DMC3 54 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 PLGLAQ15195 96 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 NDUFA5Q16718 116 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 C10orf55Q5SWW7 151 aa8.03□□□□□ -1.12
LIG1-213ENST00000596672 ACSM6Q6P461 480 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms