RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 C12orf45Q8N5I9 185 aaPredicted RBP9.34□□□□□ -0.91
CDRT1-207ENST00000583965 Q8N6K4 173 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 OR8H1Q8NGG4 311 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 OR52B4Q8NGK2 314 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 EAF1Q96JC9 268 aaPredicted RBP9.34□□□□□ -0.91
CDRT1-207ENST00000583965 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 TSNAXQ99598 290 aaKnown RBP9.34□□□□□ -0.91
CDRT1-207ENST00000583965 PLEKHA2Q9HB19 425 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 RAB18Q9NP72 206 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 COMMD9Q9P000 198 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 VPREB3Q9UKI3 123 aa9.34□□□□□ -0.91
CDRT1-207ENST00000583965 TET2Q6N021 2002 aaPredicted RBP9.34□□□□□ -0.91
CDRT1-207ENST00000583965 A6NDX4 124 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 BOLA2-SMG1P6H3BVE0 249 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 CLDN34H7C241 214 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 SHOXO15266 292 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 OR2A4O95047 310 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 SPDEFO95238 335 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 SFT2D2O95562 160 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 HRASP01112 189 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 IFNA2P01563 188 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 HLA-AP01891 365 aaKnown RBP9.33□□□□□ -0.92
CDRT1-207ENST00000583965 SERPINE2P07093 398 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 OR5AC1P0C628 307 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 CD24P25063 80 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 UCP1P25874 307 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 HILS1P60008 231 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 RPS16P62249 146 aaKnown RBP9.33□□□□□ -0.92
CDRT1-207ENST00000583965 SUPT4H1P63272 117 aaKnown RBP9.33□□□□□ -0.92
CDRT1-207ENST00000583965 SRPXP78539 464 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 ZNF585BQ52M93 769 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 OR2B11Q5JQS5 317 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 RBM14Q96PK6 669 aaKnown RBP9.33□□□□□ -0.92
CDRT1-207ENST00000583965 OR2A7Q96R45 310 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 TMEM222Q9H0R3 208 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 RANGRFQ9HD47 186 aaPredicted RBP9.33□□□□□ -0.92
CDRT1-207ENST00000583965 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
CDRT1-207ENST00000583965 DNAJC9-AS1A6NH13 148 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 M0QZK8 103 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 RAMP3O60896 148 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 ATG12O94817 140 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 OR2F2O95006 317 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 GIPP09681 153 aaPredicted RBP9.32□□□□□ -0.92
CDRT1-207ENST00000583965 CXCL3P19876 107 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 VAMP1P23763 118 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 LPAR6P43657 344 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 CD83Q01151 205 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 SRSF4Q08170 494 aaKnown RBP9.32□□□□□ -0.92
CDRT1-207ENST00000583965 HNF4GQ14541 408 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 TMEM187Q14656 261 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 SLC9A3R2Q15599 337 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 POU2AF1Q16633 256 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 NPBQ8NG41 125 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 GLYATL2Q8WU03 294 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 IL22RA2Q969J5 263 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 FYTTD1Q96QD9 318 aaKnown RBP9.32□□□□□ -0.92
CDRT1-207ENST00000583965 PHB2Q99623 299 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 SLC25A33Q9BSK2 321 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 ZNF436Q9C0F3 470 aaPredicted RBP9.32□□□□□ -0.92
CDRT1-207ENST00000583965 KIAA1456Q9P272 454 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 MGAT4CQ9UBM8 478 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
CDRT1-207ENST00000583965 SETD2Q9BYW2 2564 aaPredicted RBP9.32□□□□□ -0.92
CDRT1-207ENST00000583965 NBR2O15453 112 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 FGF16O43320 207 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 TCF21O43680 179 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 S1PR2O95136 353 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 NDUFA3O95167 84 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 CDS2O95674 445 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 C1QBP02746 253 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 NQO2P16083 231 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
CDRT1-207ENST00000583965 ERVK-16P61578 105 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 MMDQ15546 238 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 LY6EQ16553 131 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 SP6Q3SY56 376 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 VMA21Q3ZAQ7 101 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 LGI3Q8N145 548 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 TEX45Q8NA69 505 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 VSTM2AQ8TAG5 236 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 RBPMSQ93062 196 aaKnown RBP9.31□□□□□ -0.92
CDRT1-207ENST00000583965 RHOVQ96L33 236 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 TMEM56Q96MV1 263 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 ESM1Q9NQ30 184 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 PLSCR3Q9NRY6 295 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 TMEM56-RWDD3S4R434 201 aa9.31□□□□□ -0.92
CDRT1-207ENST00000583965 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 DUXBA0A1W2PPF3 345 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 MARCH11A6NNE9 402 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 RRHO14718 337 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 IGLV2-23P01705 113 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 RNASE1P07998 156 aaKnown RBP9.3□□□□□ -0.92
CDRT1-207ENST00000583965 F2RL1P55085 397 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 UBE2KP61086 200 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 RAP2BP61225 183 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 PSG5Q15238 335 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 FBLN7Q53RD9 439 aa9.3□□□□□ -0.92
CDRT1-207ENST00000583965 TMEM219Q86XT9 240 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms