RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 COX7A2LO14548 114 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 NIPSNAP2O75323 286 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 AHSA1O95433 338 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 ALDH3A1P30838 453 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 EMP1P54849 157 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 ERHP84090 104 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 EMX1Q04741 257 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 RSU1Q15404 277 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 MIAQ16674 131 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 C1orf194Q5T5A4 169 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 C1orf195Q5TG92 126 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 PTRHD1Q6GMV3 140 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 SLC35E3Q7Z769 313 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 SLC22A24Q8N4F4 322 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 RNASE11Q8TAA1 199 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 DCANP1Q8TF63 244 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 OPTNQ96CV9 577 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 OR52B2Q96RD2 323 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 SPZ1Q9BXG8 430 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 XAGE1AQ9HD64 81 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 HHLA3Q9XRX5 114 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 DSCAML1Q8TD84 2053 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 LTBP2Q14767 1821 aa1.5□□□□□ -2.17
SMCHD1-209ENST00000583441 RTEL1-TNFRSF6BF6WH68 1400 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 OTOFQ9HC10 1997 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 MDFIC2A0A1B0GVS7 189 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 OR4C45A6NMZ5 311 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 RPS12P25398 132 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 PSMB8P28062 276 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 MARCKSL1P49006 195 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 UBE2IP63279 158 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 CAV1Q03135 178 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 FABP9Q0Z7S8 132 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 LRRC75BQ2VPJ9 315 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 CCDC122Q5T0U0 273 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 LYZL1Q6UWQ5 148 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 ZNF550Q7Z398 422 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 GID4Q8IVV7 300 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 ZNF675Q8TD23 568 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 RNASE6Q93091 150 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 PTH2Q96A98 100 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 DIRAS2Q96HU8 199 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 NMNAT3Q96T66 252 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 FAM96AQ9H5X1 160 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 RSL24D1Q9UHA3 163 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 ANAPC10Q9UM13 185 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 LSM5Q9Y4Y9 91 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 ADGRB3O60242 1522 aa1.49□□□□□ -2.17
SMCHD1-209ENST00000583441 CHD2O14647 1828 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 A0A0G2JQZ4 141 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 A0A0J9YW62 118 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 J3QQQ9 107 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 M0R036 132 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 KCNK1O00180 336 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 REG1AP05451 166 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 FAM228BP0C875 321 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 CCR7P32248 378 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 RAP1GDS1P52306 607 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 RPL26P61254 145 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 NAA20P61599 178 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 GLO1Q04760 184 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 PRDX4Q13162 271 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 PCOTHQ58A44 107 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 OR10K2Q6IF99 312 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 GPR32P1Q8NGA4 272 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 SLC7A6Q92536 515 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 ROPN1LQ96C74 230 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 RPL26L1Q9UNX3 145 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 PRELID1Q9Y255 219 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 PXMP4Q9Y6I8 212 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 DOCK6Q96HP0 2047 aa1.48□□□□□ -2.17
SMCHD1-209ENST00000583441 ABCC12Q96J65 1359 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 FBN3Q75N90 2809 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 TGOLN2O43493 480 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 KLRC4O43908 158 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 CREBL2O60519 120 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 CALB1P05937 261 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 BPGMP07738 259 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 CA5AP35218 305 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 RAB5BP61020 215 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 TNFAIP6P98066 277 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 HES1Q14469 280 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 HIST3H3Q16695 136 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 COQ5Q5HYK3 327 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 UMODL1-AS1Q8N2C9 162 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 TBC1D19Q8N5T2 526 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 PACRGLQ8N7B6 248 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 MNS1Q8NEH6 495 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 SGMS2Q8NHU3 365 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 ASB17Q8WXJ9 295 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 DOHHQ9BU89 302 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 ANGPT4Q9Y264 503 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 TIMM9Q9Y5J7 89 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 BAHCC1Q9P281 2608 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 MYO9BQ13459 2157 aa1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 ZNF638Q14966 1978 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-209ENST00000583441 ZNF532Q9HCE3 1301 aa1.46□□□□□ -2.18
SMCHD1-209ENST00000583441 GPX1P07203 203 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms