RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SLC22A4Q9H015 551 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 OR51B6Q9H340 312 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 PSMD13Q9UNM6 376 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 CLTCL1P53675 1640 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 NRXN3Q9Y4C0 1643 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 CHD5Q8TDI0 1954 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 PLXNA3P51805 1871 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 TRPM2O94759 1503 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 NEXMIFQ5QGS0 1516 aa1.86□□□□□ -2.11
SMCHD1-205ENST00000581383 A0A1W2PP64 1363 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 NUP155O75694 1391 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 SETBP1Q9Y6X0 1596 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 ADGRL3Q9HAR2 1447 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 TMEM131LA2VDJ0 1609 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 ITGB4P16144 1822 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 C1orf232A0A0U1RR37 186 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 GRIFINA4D1Z8 144 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 GOLGA8KD6RF30 607 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 H3BPC8 53 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 GOLGA8MH3BSY2 632 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 J3QKU1 62 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 M0R381 172 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 ITGB1BP1O14713 200 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 BIRC5O15392 142 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 IGKV1-16P04430 117 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 GZMBP10144 247 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 CCL3P10147 92 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 HIST1H1CP16403 213 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 CD36P16671 472 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 ALOX5APP20292 161 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 IFNGR2P38484 337 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 GNA13Q14344 377 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 FAM19A5Q7Z5A7 132 aaPredicted RBP1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 C1orf174Q8IYL3 243 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 FAM9CQ8IZT9 166 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 ASB13Q8WXK3 278 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 FGF13Q92913 245 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 TMBIM1Q969X1 311 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 SMIM19Q96E16 107 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 OR52B2Q96RD2 323 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 PECRQ9BY49 303 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 CXCL16Q9H2A7 254 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 SLC2A9Q9NRM0 540 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 C1orf167Q5SNV9 1468 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 E9PCH4 1651 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 PHLPP1O60346 1717 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 COL4A2P08572 1712 aa1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 XRN1Q8IZH2 1706 aaKnown RBP1.85□□□□□ -2.11
SMCHD1-205ENST00000581383 XIRP1Q702N8 1843 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 IQGAP3Q86VI3 1631 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 NALCNQ8IZF0 1738 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 MUC21A0A0G2JKD1 596 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 MUC21A0A140T8X8 626 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 C11orf86A6NJI1 115 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 OR11H12B2RN74 326 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 UBE2L6O14933 153 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 CETN3O15182 167 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 CD79BP40259 229 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 FABP5Q01469 135 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 AMTNQ6UX39 209 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 LRRC34Q8IZ02 419 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 TMEM251Q8N6I4 163 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 OR2D3Q8NGH3 330 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 OR11H2Q8NH07 326 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 DHRS9Q9BPW9 319 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 LLPHQ9BRT6 129 aaKnown RBP1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 SPANXB1Q9NS25 103 aaPredicted RBP1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 PLEKHJ1Q9NW61 149 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 EMC3Q9P0I2 261 aa1.84□□□□□ -2.11
SMCHD1-205ENST00000581383 NAIPQ13075 1403 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 COL5A3P25940 1745 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 MYOM2P54296 1465 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 PXDNQ92626 1479 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 MDFIC2A0A1B0GVS7 189 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 F5H768 121 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 H3BRN7 92 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 IL6P05231 212 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 RPL14P50914 215 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 TMEM33P57088 247 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 GLT6D1Q7Z4J2 308 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 DEFB132Q7Z7B7 95 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 OR4X1Q8NH49 305 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 KCTD7Q96MP8 289 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 MIEN1Q9BRT3 115 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 NKX6-2Q9C056 277 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 DERL2Q9GZP9 239 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 PCYT1BQ9Y5K3 369 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 THSD7AQ9UPZ6 1657 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 ROCK1Q13464 1354 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 SRCAPQ6ZRS2 3230 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 DCCP43146 1447 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 SETD5Q9C0A6 1442 aa1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 RRBP1Q9P2E9 1410 aaKnown RBP1.83□□□□□ -2.12
SMCHD1-205ENST00000581383 RALGAPBQ86X10 1494 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 SORL1Q92673 2214 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 GLI3P10071 1580 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 CDC42BPGQ6DT37 1551 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 NHSL1Q5SYE7 1610 aa1.82□□□□□ -2.12
SMCHD1-205ENST00000581383 TMEM235A6NFC5 223 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms