RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 PAFAH1B3Q15102 231 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 PYCR3Q53H96 274 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 LCN12Q6JVE5 192 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 RFLNAQ6ZTI6 216 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 H2AFVQ71UI9 128 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 NEGR1Q7Z3B1 354 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 OAFQ86UD1 273 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 MUC15Q8N387 334 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 UBL4BQ8N7F7 174 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 CHST4Q8NCG5 386 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 OR52E4Q8NGH9 312 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 OR9G1Q8NH87 305 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 MFSD8Q8NHS3 518 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 ZFP90Q8TF47 636 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 CYGBQ8WWM9 190 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 EXOSC8Q96B26 276 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 FMC1Q96HJ9 113 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 BTF3L4Q96K17 158 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 OR2M4Q96R27 311 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 RIOK2Q9BVS4 552 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 RNASE7Q9H1E1 156 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 C20orf85Q9H1P6 137 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 SPNS1Q9H2V7 528 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 NMNAT1Q9HAN9 279 aaPredicted RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 RRAGDQ9NQL2 400 aaPredicted RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 C14orf105Q9NVL8 296 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 DNAJC27Q9NZQ0 273 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 DOK5Q9P104 306 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 ZNF223Q9UK11 482 aaPredicted RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 RPL26L1Q9UNX3 145 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 BTRCQ9Y297 605 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 TP53TG5Q9Y2B4 290 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 CARHSP1Q9Y2V2 147 aaKnown RBP2.85□□□□□ -1.95
NF1-220ENST00000581113 UGT2A1Q9Y4X1 527 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 MYLKQ15746 1914 aa2.85□□□□□ -1.95
NF1-220ENST00000581113 IGHV5-10-1A0A0J9YXX1 117 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 FAM236DA0A1B0GTK5 79 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 CIB4A0PJX0 185 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 C8orf87E5RJ46 101 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 F8W036 122 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 CST8O60676 142 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 OR7C1O76099 320 aaPredicted RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 HLA-DQB2P05538 268 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 GKN3PP0CG01 181 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 OR13C7P0DN81 318 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 FAM236CP0DP71 79 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 CCL4P13236 92 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 KDELR1P24390 212 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 PRSS3P35030 304 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 LGALS7P47929 136 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 SPINT3P49223 89 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 RAB2AP61019 212 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 RPS23P62266 143 aaKnown RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 HBG1P69891 147 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 HBG2P69892 147 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 ARFRP1Q13795 201 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 C16orf72Q14CZ0 275 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 NSDHLQ15738 373 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 MPPED2Q15777 294 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 LINC00303Q3SY05 128 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 TTC32Q5I0X7 151 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 PAGE3Q5JUK9 113 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 HENMT1Q5T8I9 393 aaKnown RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 RPL13AP3Q6NVV1 102 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 LINC00173Q6ZV60 143 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 SLC16A13Q7RTY0 426 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 ZCCHC24Q8N2G6 241 aaKnown RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 ZNF433Q8N7K0 673 aaPredicted RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 Q8N9L7 120 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 OR13C6PQ8NH95 151 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 ZFAND1Q8TCF1 268 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 CD200R1Q8TD46 325 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 PATE1Q8WXA2 126 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 TAMM41Q96BW9 452 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 TM4SF18Q96CE8 201 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 FXYD5Q96DB9 178 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 DIRAS2Q96HU8 199 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 COX14Q96I36 57 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 SLC35E1Q96K37 410 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 FOPNLQ96NB1 174 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 RDH12Q96NR8 316 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 METTL26Q96S19 204 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 LYSMD1Q96S90 227 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 GINS3Q9BRX5 216 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 MARVELD1Q9BSK0 173 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 EDA2RQ9HAV5 297 aa2.84□□□□□ -1.95
NF1-220ENST00000581113 RBFOX1Q9NWB1 397 aaKnown RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 COL27A1Q8IZC6 1860 aaPredicted RBP2.84□□□□□ -1.95
NF1-220ENST00000581113 RP1P56715 2156 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 A0A1B0GXF2 115 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 IGSF23A1L1A6 192 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 PRORSD1PA6NEY8 169 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 J3QKU1 62 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 TRAF3IP2O43734 574 aaPredicted RBP2.84□□□□□ -1.96
NF1-220ENST00000581113 PDE6DO43924 150 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 SMIM24O75264 130 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 REM1O75628 298 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 YIF1AO95070 293 aa2.84□□□□□ -1.96
NF1-220ENST00000581113 OR10J4P0C629 311 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms