RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ARHGAP5-AS1Q96IT6 56 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 ADTRPQ96IZ2 230 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 ZNF430Q9H8G1 570 aaPredicted RBP7.4□□□□□ -1.22
RFFL-208ENST00000581039 SMPD3Q9NY59 655 aaPredicted RBP7.4□□□□□ -1.22
RFFL-208ENST00000581039 MLXQ9UH92 298 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 ZNF257Q9Y2Q1 563 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 KMT2AQ03164 3969 aa7.4□□□□□ -1.23
RFFL-208ENST00000581039 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 TRAV25A0A0B4J276 109 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 TMEM213A2RRL7 107 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 DPPA5A6NC42 116 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 IGHV3-23P01764 117 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 CD3GP09693 182 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 P2RY14Q15391 338 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 HSD17B12Q53GQ0 312 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 IGSF11Q5DX21 431 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 BTNL8Q6UX41 500 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 CLEC19AQ6UXS0 136 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 CEACAM19Q7Z692 300 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 OR2C3Q8N628 320 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 DCUN1D5Q9BTE7 237 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 PECRQ9BY49 303 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 PLGRKTQ9HBL7 147 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 RYR1P21817 5038 aa7.39□□□□□ -1.23
RFFL-208ENST00000581039 TRBV6-7A0A0A0MS04 114 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 HMX3A6NHT5 357 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 FOXI3A8MTJ6 420 aaPredicted RBP7.38□□□□□ -1.23
RFFL-208ENST00000581039 A8MWP6 167 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 GSTT2P0CG29 244 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 GSTT2BP0CG30 244 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 SAA1P0DJI8 122 aaPredicted RBP7.38□□□□□ -1.23
RFFL-208ENST00000581039 CD37P11049 281 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 DUTP33316 252 aaKnown RBP7.38□□□□□ -1.23
RFFL-208ENST00000581039 CDK10Q15131 360 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 ZNF585BQ52M93 769 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 C10orf55Q5SWW7 151 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 NANOGP1Q8N7R0 232 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 SETD9Q8NE22 299 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 OR56B1Q8NGI3 324 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 MARC2Q969Z3 335 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 EEF1AKMT3Q96AZ1 226 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 RNF183Q96D59 192 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 C5orf30Q96GV9 206 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 GINS4Q9BRT9 223 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 S4R3C0 116 aa7.38□□□□□ -1.23
RFFL-208ENST00000581039 KIR2DL5BA0A0G2JN68 375 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 KIR2DL5BA0A0G2JPC4 375 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 LINC00473A8K010 186 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 NPIPB5A8MRT5 1133 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 FCGR3BO75015 233 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 DIRAS3O95661 229 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 DHFRP00374 187 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 IFNA4P05014 189 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 CLEC3BP05452 202 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 PLAC9Q5JTB6 97 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 KIR2DL5AQ8N109 375 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 PQLC1Q8N2U9 271 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 KIR2DL5BQ8NHK3 375 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 CYGBQ8WWM9 190 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 FYTTD1Q96QD9 318 aaKnown RBP7.37□□□□□ -1.23
RFFL-208ENST00000581039 CABLES2Q9BTV7 478 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 OR51E2Q9H255 320 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 S100A14Q9HCY8 104 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 MRPL27Q9P0M9 148 aaKnown RBP7.37□□□□□ -1.23
RFFL-208ENST00000581039 UBQLN2Q9UHD9 624 aa7.37□□□□□ -1.23
RFFL-208ENST00000581039 TEX22C9J3V5 150 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 SLC17A2O00624 439 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 CDK1P06493 297 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 IL6RP08887 468 aaPredicted RBP7.36□□□□□ -1.23
RFFL-208ENST00000581039 C8orf88P0DMB2 117 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 HIST1H1BP16401 226 aaKnown RBP7.36□□□□□ -1.23
RFFL-208ENST00000581039 MED22Q15528 200 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 RAB11BQ15907 218 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 AHSA2Q719I0 299 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 FBLIM1Q8WUP2 373 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 FANCD2OSQ96PS1 177 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 SPAG8Q99932 426 aaPredicted RBP7.36□□□□□ -1.23
RFFL-208ENST00000581039 CENPOQ9BU64 300 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 C5orf66Q9H5L9 145 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 SLC2A9Q9NRM0 540 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 PSORS1C1Q9UIG5 152 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 PRELID3BQ9Y3B1 194 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 UFC1Q9Y3C8 167 aa7.36□□□□□ -1.23
RFFL-208ENST00000581039 TRBV7-1A0A0A6YYK4 115 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 ERICH4A6NGS2 130 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 DENRO43583 198 aaKnown RBP7.35□□□□□ -1.23
RFFL-208ENST00000581039 CRYGCP07315 174 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 FCGR3AP08637 254 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 UCHL1P09936 223 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 DEFA4P12838 97 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 MYOD1P15172 320 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
RFFL-208ENST00000581039 GALP22466 123 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 PSMB6P28072 239 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 MAS1LP35410 378 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 RANBP1P43487 201 aa7.35□□□□□ -1.23
RFFL-208ENST00000581039 RPL27AP46776 148 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms