RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 LGALS7P47929 136 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 FGL1Q08830 312 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 IAH1Q2TAA2 248 aaPredicted RBP10.83□□□□□ -0.68
SRSF1-202ENST00000578430 LHFPL4Q7Z7J7 247 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 CHIAQ9BZP6 476 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 RANBP3Q9H6Z4 567 aaPredicted RBP10.83□□□□□ -0.68
SRSF1-202ENST00000578430 ZFP57Q9NU63 452 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 COA4Q9NYJ1 87 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 CACFD1Q9UGQ2 172 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
SRSF1-202ENST00000578430 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 TIMM23O14925 209 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 KRASP01116 189 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 P0C879 139 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 BRS3P32247 399 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 SMCO1Q147U7 214 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 SSX2Q16385 188 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 H2BFWTQ7Z2G1 175 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 CIARTQ8N365 385 aaPredicted RBP10.82□□□□□ -0.68
SRSF1-202ENST00000578430 ZBTB8BQ8NAP8 495 aaPredicted RBP10.82□□□□□ -0.68
SRSF1-202ENST00000578430 DMBX1Q8NFW5 382 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 VSTM2AQ8TAG5 236 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 NANPQ8TBE9 248 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 CFHR4Q92496 578 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 GPR146Q96CH1 333 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 OR10C1Q96KK4 312 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 RHOVQ96L33 236 aa10.82□□□□□ -0.68
SRSF1-202ENST00000578430 MS4A7Q9GZW8 240 aaPredicted RBP10.82□□□□□ -0.68
SRSF1-202ENST00000578430 NIPBLQ6KC79 2804 aaeCLIP10.81□□□□□ -0.68
SRSF1-202ENST00000578430 MPTX1A8MV57 137 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 SHOXO15266 292 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 FSHBP01225 129 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 IGKV1-16P04430 117 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 G6PCP35575 357 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 IL15RAQ13261 267 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 KLF17Q5JT82 389 aaPredicted RBP10.81□□□□□ -0.68
SRSF1-202ENST00000578430 THNSL2Q86YJ6 484 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 OR2T35Q8NGX2 323 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 AJUBAQ96IF1 538 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 HARBI1Q96MB7 349 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 FYTTD1Q96QD9 318 aaKnown RBP10.81□□□□□ -0.68
SRSF1-202ENST00000578430 TSNAXQ99598 290 aaKnown RBP10.81□□□□□ -0.68
SRSF1-202ENST00000578430 MEGF9Q9H1U4 602 aa10.81□□□□□ -0.68
SRSF1-202ENST00000578430 NAV3Q8IVL0 2385 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 FAM90A26D6RGX4 464 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 SMAD7O15105 426 aaKnown RBP10.8□□□□□ -0.68
SRSF1-202ENST00000578430 CD5LO43866 347 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 PITX3O75364 302 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 VENTXO95231 258 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 SPDEFO95238 335 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 AVPP01185 164 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 C1QBP02746 253 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 FGF2P09038 288 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 PET100P0DJ07 73 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 IGHV4-38-2P0DP08 117 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 DYNLT3P51808 116 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 RPS16P62249 146 aaKnown RBP10.8□□□□□ -0.68
SRSF1-202ENST00000578430 EBI3Q14213 229 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 AANATQ16613 207 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 OR4D5Q8NGN0 318 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 OR2T10Q8NGZ9 312 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 OR4A5Q8NH83 315 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.8□□□□□ -0.68
SRSF1-202ENST00000578430 BET1LQ9NYM9 111 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 GSKIPQ9P0R6 139 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 NUP50Q9UKX7 468 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 FAM96BQ9Y3D0 163 aa10.8□□□□□ -0.68
SRSF1-202ENST00000578430 IGHV3-72A0A0B4J1Y9 119 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 A0A0G2JRQ6 117 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 SNAPC5O75971 98 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 MOSP00540 346 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 IL6RP08887 468 aaPredicted RBP10.79□□□□□ -0.68
SRSF1-202ENST00000578430 FBP1P09467 338 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 FAM106CPP0CH98 169 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 PSMB6P28072 239 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 UBE2KP61086 200 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 RUSC1-AS1Q66K80 236 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 C9orf139Q6ZV77 190 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 FOXRED2Q8IWF2 684 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 PUSL1Q8N0Z8 303 aaKnown RBP10.79□□□□□ -0.68
SRSF1-202ENST00000578430 DYNAPQ8N1N2 210 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 TEX45Q8NA69 505 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 OR1S1Q8NH92 325 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 PPP1R1CQ8WVI7 109 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 TMEM140Q9NV12 185 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 CACNG5Q9UF02 275 aa10.79□□□□□ -0.68
SRSF1-202ENST00000578430 ST8SIA3O43173 380 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 RLN2P04090 185 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 NKX2-1P43699 371 aaPredicted RBP10.78□□□□□ -0.68
SRSF1-202ENST00000578430 ID3Q02535 119 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 OR4A47Q6IF82 309 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 BRD3OSQ6XYD6 125 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 ZNF429Q86V71 674 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 OR8H1Q8NGG4 311 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 OR4A16Q8NH70 328 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 TMEM167AQ8TBQ9 72 aa10.78□□□□□ -0.68
SRSF1-202ENST00000578430 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms