RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 SECTM1Q8WVN6 248 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 MOB3AQ96BX8 217 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 SLC5A7Q9GZV3 580 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 CCL28Q9NRJ3 127 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 V9GYH0 126 aa10.62□□□□□ -0.71
CIITA-210ENST00000575513 RBFOX2O43251 390 aaKnown RBP eCLIP10.61□□□□□ -0.71
CIITA-210ENST00000575513 CREBL2O60519 120 aaPredicted RBP10.61□□□□□ -0.71
CIITA-210ENST00000575513 FCGR3BO75015 233 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 CA2P00918 260 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 PF4P02776 101 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 RAB9AP51151 201 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 TAS2R19P59542 299 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 HERV-K104P61576 105 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 FXYD3Q14802 87 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 OR5M8Q8NGP6 311 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 OR4S2Q8NH73 311 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 UBE2E2Q96LR5 201 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 AIFM2Q9BRQ8 373 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 TAS2R8Q9NYW2 309 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
CIITA-210ENST00000575513 FBXO7Q9Y3I1 522 aa10.61□□□□□ -0.71
CIITA-210ENST00000575513 NUDT19A8MXV4 375 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 CNIH1O95406 144 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 BRI3O95415 125 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 DUS4LO95620 317 aaKnown RBP10.6□□□□□ -0.71
CIITA-210ENST00000575513 CD3DP04234 171 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 CD33P20138 364 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 CD40LGP29965 261 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 GNRHRP30968 328 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 BRWD1-AS2P59051 145 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 RUNX1Q01196 453 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 KIAA0141Q14154 515 aaPredicted RBP10.6□□□□□ -0.71
CIITA-210ENST00000575513 PRSS8Q16651 343 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
CIITA-210ENST00000575513 SPANXN2Q5MJ10 180 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 SAMD5Q5TGI4 173 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 ARRDC1Q8N5I2 433 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 ZNF491Q8N8L2 437 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 CD300LFQ8TDQ1 290 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 C4orf3Q8WVX3 66 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 P2RX4Q99571 388 aa10.6□□□□□ -0.71
CIITA-210ENST00000575513 ZNF2Q9BSG1 426 aaPredicted RBP10.6□□□□□ -0.71
CIITA-210ENST00000575513 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 M0QYG6 137 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 ARPC1BO15143 372 aaKnown RBP10.59□□□□□ -0.71
CIITA-210ENST00000575513 RAB3DO95716 219 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 HRASP01112 189 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 UCP3P55916 312 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 FXYD4P59646 89 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 TSPAN5P62079 268 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 SSBP2P81877 361 aaPredicted RBP10.59□□□□□ -0.71
CIITA-210ENST00000575513 PJVKQ0ZLH3 352 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 CATR1Q13166 79 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 ZNF79Q15937 498 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 ECSCRQ19T08 205 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 MRGPRG-AS1Q2M3A8 158 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
CIITA-210ENST00000575513 STEAP1BQ6NZ63 245 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 LPCAT3Q6P1A2 487 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 UNQ5815/PRO19632Q6UWF5 114 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 ETV3LQ6ZN32 361 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 ZNF818PQ6ZRF7 136 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 LINC00299Q6ZSB3 139 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 TMEM17Q86X19 198 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 CMTM1Q8IZ96 169 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 LINC00482Q8N8I6 264 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 LFNGQ8NES3 379 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 ABHD5Q8WTS1 349 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 RCC1LQ96I51 464 aaKnown RBP10.59□□□□□ -0.71
CIITA-210ENST00000575513 TINAGL1Q9GZM7 467 aaPredicted RBP10.59□□□□□ -0.71
CIITA-210ENST00000575513 KLK15Q9H2R5 256 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 SLA2Q9H6Q3 261 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 TPSG1Q9NRR2 321 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 VSIG4Q9Y279 399 aa10.59□□□□□ -0.71
CIITA-210ENST00000575513 A0A1W2PN81 502 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 ANKRD20A5PA0PJZ0 165 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 H3BUA1 57 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 CCL24O00175 119 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 SOX15O60248 233 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 IFNA6P05013 189 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 CHRNA7P36544 502 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 MEF2DQ14814 521 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 PYDC2Q56P42 97 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 LCNL1Q6ZST4 164 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 C18orf65Q6ZTR6 163 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 LHFPL1Q86WI0 220 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 MRPL41Q8IXM3 137 aaKnown RBP10.58□□□□□ -0.72
CIITA-210ENST00000575513 MMD2Q8IY49 270 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 POC5Q8NA72 575 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 THAP7Q9BT49 309 aaPredicted RBP10.58□□□□□ -0.72
CIITA-210ENST00000575513 FXYD6Q9H0Q3 95 aa10.58□□□□□ -0.72
CIITA-210ENST00000575513 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
CIITA-210ENST00000575513 TNFSF12O43508 249 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms