RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 HLA-DRB3P79483 266 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 SSX1Q16384 188 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 TMEM41BQ5BJD5 291 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 YIF1BQ5BJH7 314 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 TTC23Q5W5X9 447 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 OR5B3Q8NH48 314 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 SMIM19Q96E16 107 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 CENPOQ9BU64 300 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 PLEKHJ1Q9NW61 149 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 THYN1Q9P016 225 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 SELENOKQ9Y6D0 94 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 HERC1Q15751 4861 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 CYB5BO43169 146 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 AMBPP02760 352 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 DEFA4P12838 97 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 GTF2A1P52655 376 aaPredicted RBP6.34□□□□□ -1.39
SMG1-216ENST00000569122 GYS2P54840 703 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 CDK10Q15131 360 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 ODF3L2Q3SX64 289 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 DNAL1Q4LDG9 190 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 PLET1Q6UQ28 207 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 C6orf201Q7Z4U5 140 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 ZNF645Q8N7E2 425 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 VSTM2AQ8TAG5 236 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 FYTTD1Q96QD9 318 aaKnown RBP6.34□□□□□ -1.39
SMG1-216ENST00000569122 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
SMG1-216ENST00000569122 SLC2A9Q9NRM0 540 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 RDH8Q9NYR8 311 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 OR1A1Q9P1Q5 309 aa6.34□□□□□ -1.39
SMG1-216ENST00000569122 DNAH17Q9UFH2 4485 aa6.34□□□□□ -1.4
SMG1-216ENST00000569122 HSPG2P98160 4391 aa6.34□□□□□ -1.4
SMG1-216ENST00000569122 TRBV5-5A0A0J9YX44 114 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 OGG1O15527 345 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 CRYZL1O95825 349 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 BPNT1O95861 308 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 IGHV3-23P01764 117 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 CRYGCP07315 174 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 MIFP14174 115 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 SRMP19623 302 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 HLA-DMBP28068 263 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 MAS1LP35410 378 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 MRGPRG-AS1Q2M3A8 158 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 KLK9Q2XQG4 91 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 C1orf134Q5TEV5 83 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 UNQ9165/PRO28630Q6UXU0 137 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 CMTM3Q96MX0 182 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 SLC29A1Q99808 456 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 TMEM59Q9BXS4 323 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 OR2D2Q9H210 308 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 ZNF430Q9H8G1 570 aaPredicted RBP6.33□□□□□ -1.4
SMG1-216ENST00000569122 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 MRPS18AQ9NVS2 196 aaKnown RBP6.33□□□□□ -1.4
SMG1-216ENST00000569122 SDHAF2Q9NX18 166 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 BABAM2Q9NXR7 383 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 SMPD3Q9NY59 655 aaPredicted RBP6.33□□□□□ -1.4
SMG1-216ENST00000569122 KLK9Q9UKQ9 250 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 POMPQ9Y244 141 aa6.33□□□□□ -1.4
SMG1-216ENST00000569122 RBM7Q9Y580 266 aaKnown RBP6.33□□□□□ -1.4
SMG1-216ENST00000569122 TRAV8-7A0A075B6U6 113 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 DEFB131BA0A096LNP1 70 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 C15orf61A6NNL5 157 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 TRDCB7Z8K6 153 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 DEFB4AO15263 64 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 GYG2O15488 501 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 DIRAS3O95661 229 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 CA1P00915 261 aaPredicted RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 CD5P06127 495 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 NPY1RP25929 384 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 MAPK3P27361 379 aaPredicted RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 RANBP1P43487 201 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 RPL27AP46776 148 aaKnown RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 RPS27AP62979 156 aaKnown RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 PAFAH1B2P68402 229 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 IRF3Q14653 427 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 IDO2Q6ZQW0 420 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 CEACAM19Q7Z692 300 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 UBE2DNLQ8IWF7 75 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 OR4A4PQ8NGN8 299 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 OR10J5Q8NHC4 309 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 CENPNQ96H22 339 aaPredicted RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 DCUN1D5Q9BTE7 237 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 URM1Q9BTM9 101 aaKnown RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 TM2D1Q9BX74 207 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 ZNF436Q9C0F3 470 aaPredicted RBP6.32□□□□□ -1.4
SMG1-216ENST00000569122 Q9N2K0 584 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 C12orf4Q9NQ89 552 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 PRELID3BQ9Y3B1 194 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 AP4S1Q9Y587 144 aa6.32□□□□□ -1.4
SMG1-216ENST00000569122 TRBV5-7A0A0A0MS05 114 aa6.31□□□□□ -1.4
SMG1-216ENST00000569122 IRGMA1A4Y4 181 aa6.31□□□□□ -1.4
SMG1-216ENST00000569122 K7EMT4 169 aa6.31□□□□□ -1.4
SMG1-216ENST00000569122 SAA1P0DJI8 122 aaPredicted RBP6.31□□□□□ -1.4
SMG1-216ENST00000569122 PTBP1P26599 531 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMG1-216ENST00000569122 DCKP27707 260 aa6.31□□□□□ -1.4
SMG1-216ENST00000569122 HTR2CP28335 458 aa6.31□□□□□ -1.4
SMG1-216ENST00000569122 PSMD7P51665 324 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms