RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 OR4C13Q8NGP0 309 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 FLYWCH2Q96CP2 140 aaKnown RBP11.58□□□□□ -0.56
COMMD4-205ENST00000562310 AQP10Q96PS8 301 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 TBX15Q96SF7 602 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 GON7Q9BXV9 100 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 LPAR2Q9HBW0 351 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 PLSCR3Q9NRY6 295 aa11.58□□□□□ -0.56
COMMD4-205ENST00000562310 RCL1Q9Y2P8 373 aaKnown RBP11.58□□□□□ -0.56
COMMD4-205ENST00000562310 TBL2Q9Y4P3 447 aaKnown RBP11.58□□□□□ -0.56
COMMD4-205ENST00000562310 IGHV1-3A0A0C4DH29 117 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 RNF222A6NCQ9 220 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 RNASEK-C17orf49H0YIS7 233 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 GPR137BO60478 399 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 LY86O95711 162 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 P2RY1P47900 373 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 UBE2E1P51965 193 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 DLX1P56177 255 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 LOXL1Q08397 574 aaPredicted RBP11.57□□□□□ -0.56
COMMD4-205ENST00000562310 KLRD1Q13241 179 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 CXorf66Q5JRM2 361 aaPredicted RBP11.57□□□□□ -0.56
COMMD4-205ENST00000562310 CCDC144NLQ6NUI1 221 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 Q6ZRM9 215 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 TMUB2Q71RG4 321 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 LHX4Q969G2 390 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 RHOVQ96L33 236 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 TMEM140Q9NV12 185 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 HSPB7Q9UBY9 170 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 ABCA2Q9BZC7 2435 aa11.57□□□□□ -0.56
COMMD4-205ENST00000562310 MYO9AB2RTY4 2548 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 A0A096LNT2 108 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 SHOXO15266 292 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 SSSCA1O60232 199 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 LGALS4P56470 323 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 POLR2GP62487 172 aaKnown RBP eCLIP11.56□□□□□ -0.56
COMMD4-205ENST00000562310 DIAPH2-AS1Q14236 149 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 OPCMLQ14982 345 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 IZUMO4Q1ZYL8 232 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 GPR157Q5UAW9 335 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 OR4A16Q8NH70 328 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 C11orf1Q9H5F2 150 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 BET1LQ9NYM9 111 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 BOLA1Q9Y3E2 137 aa11.56□□□□□ -0.56
COMMD4-205ENST00000562310 A0A1W2PPI3 338 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 KANTRA0A1W2PQU2 76 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 BCL2L11O43521 198 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 SYNGR2O43760 224 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 RBMXL2O75526 392 aaKnown RBP11.55□□□□□ -0.56
COMMD4-205ENST00000562310 IGKV1-16P04430 117 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 RPL12P30050 165 aaKnown RBP11.55□□□□□ -0.56
COMMD4-205ENST00000562310 LGALS7P47929 136 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 TAS2R30P59541 319 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
COMMD4-205ENST00000562310 PRB3Q04118 309 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-205ENST00000562310 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 SSX9Q7RTT3 188 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 MOB3BQ86TA1 216 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 ZNF429Q86V71 674 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 LINC01356Q8N9X3 169 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 OR4A5Q8NH83 315 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-205ENST00000562310 MS4A7Q9GZW8 240 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-205ENST00000562310 SLC25A31Q9H0C2 315 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 ZC4H2Q9NQZ6 224 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 PRNDQ9UKY0 176 aa11.55□□□□□ -0.56
COMMD4-205ENST00000562310 C15orf61A6NNL5 157 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 FGF2P09038 288 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 OR9G9P0C7N8 305 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 HKR1P10072 659 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 CD1BP29016 333 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 AP2S1P53680 142 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 RELBQ01201 579 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 HABP2Q14520 560 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 VMA21Q3ZAQ7 101 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 HIST2H2BCQ6DN03 193 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 PUSL1Q8N0Z8 303 aaKnown RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 OR2C3Q8N628 320 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 RNF5Q99942 180 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 MAGT1Q9H0U3 335 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 LYRM2Q9NU23 88 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-205ENST00000562310 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
COMMD4-205ENST00000562310 J3QLI3 93 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 UPK2O00526 184 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 TAAR5O14804 337 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 CHST1O43916 411 aa11.53□□□□□ -0.56
COMMD4-205ENST00000562310 TSC22D2O75157 780 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms