RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ROPN1LQ96C74 230 aa1.98□□□□□ -2.09
CASC4-206ENST00000558847 IMP4Q96G21 291 aaKnown RBP1.98□□□□□ -2.09
CASC4-206ENST00000558847 SHANK3Q9BYB0 1731 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 MYO3BQ8WXR4 1341 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 NLRC5Q86WI3 1866 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 TRGV5A0A0B4J1U4 118 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 C11orf86A6NJI1 115 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 COX7A2LO14548 114 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 REG1AP05451 166 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 OR5G3P0C626 314 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 EMP1P54849 157 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 FOXF1Q12946 379 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 MIAQ16674 131 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 AGTRAPQ6RW13 159 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 SPATA12Q7Z6I5 190 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 SLC35F6Q8N357 371 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 FGF13Q92913 245 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 CXCL16Q9H2A7 254 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 TMEM106BQ9NUM4 274 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 RSL24D1Q9UHA3 163 aaKnown RBP1.97□□□□□ -2.09
CASC4-206ENST00000558847 ANAPC10Q9UM13 185 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 ANGPT4Q9Y264 503 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 PXMP4Q9Y6I8 212 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 LCTP09848 1927 aa1.97□□□□□ -2.09
CASC4-206ENST00000558847 SLIT2O94813 1529 aa1.96□□□□□ -2.09
CASC4-206ENST00000558847 DICER1Q9UPY3 1922 aaKnown RBP1.96□□□□□ -2.1
CASC4-206ENST00000558847 BHLHE40O14503 412 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 ZNF189O75820 626 aaPredicted RBP1.96□□□□□ -2.1
CASC4-206ENST00000558847 S100A6P06703 90 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 ZNF728P0DKX0 622 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 HIST1H1EP10412 219 aaKnown RBP1.96□□□□□ -2.1
CASC4-206ENST00000558847 KCNE1P15382 129 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
CASC4-206ENST00000558847 ZNF90Q03938 601 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 PRDX4Q13162 271 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 LRRC75BQ2VPJ9 315 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 ACSM3Q53FZ2 586 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 DEFB125Q8N687 156 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 OR8J2Q8NGG1 315 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 OR52B2Q96RD2 323 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 OR52E6Q96RD3 313 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 UBAP1Q9NZ09 502 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 PRELID1Q9Y255 219 aa1.96□□□□□ -2.1
CASC4-206ENST00000558847 DHX57Q6P158 1386 aaKnown RBP1.96□□□□□ -2.1
CASC4-206ENST00000558847 COL5A1P20908 1838 aaPredicted RBP1.96□□□□□ -2.1
CASC4-206ENST00000558847 MYO9BQ13459 2157 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 KMT2EQ8IZD2 1858 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 DCCP43146 1447 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.95□□□□□ -2.1
CASC4-206ENST00000558847 S1PR2O95136 353 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 IFNA16P05015 189 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 SERPINA6P08185 405 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 ALOX5APP20292 161 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 PSMB8P28062 276 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 HAAOP46952 286 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 SULT1A1P50225 295 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 RELAQ04206 551 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 HIST2H3PS2Q5TEC6 136 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 SLC35E3Q7Z769 313 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 UMODL1-AS1Q8N2C9 162 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 TBC1D19Q8N5T2 526 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 ZNF675Q8TD23 568 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 NMNAT3Q96T66 252 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 OR51I1Q9H343 314 aa1.95□□□□□ -2.1
CASC4-206ENST00000558847 A0A0J9YW62 118 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 EVPLLA8MZ36 301 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 CREBL2O60519 120 aaPredicted RBP1.94□□□□□ -2.1
CASC4-206ENST00000558847 TNNC2P02585 160 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 CCL1P22362 96 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 OMPP47874 163 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 TNFAIP6P98066 277 aaPredicted RBP1.94□□□□□ -2.1
CASC4-206ENST00000558847 ITGB3BPQ13352 177 aaPredicted RBP1.94□□□□□ -2.1
CASC4-206ENST00000558847 OR2F1Q13607 317 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 SS18Q15532 418 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 FAM201AQ5SY85 155 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 GLT8D1Q68CQ7 371 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 SFXN4Q6P4A7 337 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 C1orf158Q8N1D5 194 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 OR1M1Q8NGA1 313 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 OR4X2Q8NGF9 303 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 TTTY12Q9BZ98 90 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 CXorf21Q9HAI6 301 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 XPNPEP1Q9NQW7 623 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 HHLA3Q9XRX5 114 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 PLB1Q6P1J6 1458 aa1.94□□□□□ -2.1
CASC4-206ENST00000558847 DOCK6Q96HP0 2047 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 IGHV3-64A0A075B6Q5 118 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 TRAV41A0A0B4J266 112 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 H3BRN7 92 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 KLRC4O43908 158 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 RPP14O95059 124 aaKnown RBP1.93□□□□□ -2.1
CASC4-206ENST00000558847 MAP2K4P45985 399 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 REG1BP48304 166 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 RPL30P62888 115 aaKnown RBP1.93□□□□□ -2.1
CASC4-206ENST00000558847 SAPCD1Q5SSQ6 148 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 LYZL1Q6UWQ5 148 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 KRTAP13-1Q8IUC0 172 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 SGMS2Q8NHU3 365 aa1.93□□□□□ -2.1
CASC4-206ENST00000558847 SLC7A6Q92536 515 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms