RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 MAS1LP35410 378 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 MDH2P40926 338 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 P2RY1P47900 373 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 SNU13P55769 128 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF121P58317 390 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 SUPT4H1P63272 117 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 ENDOGQ14249 297 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 RBM39Q14498 530 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 LRRC37A5PQ49AS3 106 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM155Q4W5P6 130 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 AADACL3Q5VUY0 350 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM268Q5VZI3 342 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OTPQ5XKR4 325 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR10K2Q6IF99 312 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 DPPA3Q6W0C5 159 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 C17orf107Q6ZR85 190 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 MOGAT3Q86VF5 341 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 LINC00346Q8IVM7 164 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 LGI3Q8N145 548 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 GVQW1Q8N7I0 195 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF283Q8N7M2 679 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 ADAD2Q8NCV1 583 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 BHLHE23Q8NDY6 225 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 Q8NFD4 153 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR4S1Q8NGB4 309 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR8B12Q8NGG6 310 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR8B3Q8NGG8 313 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR51T1Q8NGJ9 327 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR10S1Q8NGN2 331 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 CASTOR1Q8WTX7 329 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM230Q96A57 120 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 NABP1Q96AH0 204 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 PGAM5Q96HS1 289 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR2V2Q96R30 315 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 OR8B2Q96RD0 313 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 SPIN2AQ99865 258 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 SPIN2BQ9BPZ2 258 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 GINS3Q9BRX5 216 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 PECRQ9BY49 303 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 RIMS4Q9H426 269 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 TREM1Q9NP99 234 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 PNRC2Q9NPJ4 139 aaKnown RBP3.23□□□□□ -1.89
ATXN3-240ENST00000556339 UFSP2Q9NUQ7 469 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 NECAP2Q9NVZ3 263 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 EHFQ9NZC4 300 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 IL19Q9UHD0 177 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 ANXA10Q9UJ72 324 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 TMED3Q9Y3Q3 217 aa3.23□□□□□ -1.89
ATXN3-240ENST00000556339 NOTCH3Q9UM47 2321 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PPIAL4EA0A075B759 164 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 A0A0A6YYD4 124 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PPIAL4CA0A0B4J2A2 164 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 IGKV1-9A0A0C4DH69 117 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CXorf65A6NEN9 183 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FAM74A7A6NL05 159 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 A6NLC8 198 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PPIAL4DF5H284 164 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 H0YL77 283 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM178BH3BS89 294 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CCSO14618 274 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 RER1O15258 196 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SOCS1O15524 211 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ST8SIA3O43173 380 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 HSPA12AO43301 675 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CYB5R3P00387 301 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PPIAL4FP0DN26 164 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 OR5H8P0DN80 308 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SPP1P10451 314 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SLC25A6P12236 298 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 KITLGP21583 273 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 S100GP29377 79 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 BLVRBP30043 206 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FCGR2CP31995 323 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CD80P33681 288 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 GLP1RP43220 463 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 KCNJ3P48549 501 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 NPY4RP50391 375 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FUT6P51993 359 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 CD81P60033 236 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 RAB2AP61019 212 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 RND3P61587 244 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 B2MP61769 119 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PAX8Q06710 450 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 BAXQ07812 192 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 MZT1Q08AG7 82 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 PDZK1IP1Q13113 114 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF266Q14584 549 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 GNMTQ14749 295 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 OR8G1Q15617 311 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 IAH1Q2TAA2 248 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ANKRD55Q3KP44 614 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 SPRNQ5BIV9 151 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 FAM74A1Q5RGS3 127 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 DNLZQ5SXM8 178 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 ASPHD1Q5U4P2 390 aa3.22□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM42Q69YG0 159 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms