RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 SPATA12Q7Z6I5 190 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 PACRGLQ8N7B6 248 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 DAND5Q8N907 189 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF565Q8N9K5 539 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 LHFPL5Q8TAF8 219 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 C12orf43Q96C57 262 aaKnown RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 ARL5BQ96KC2 179 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 NMNAT3Q96T66 252 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 OR51I2Q9H344 312 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 PARVGQ9HBI0 331 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 BABAM2Q9NXR7 383 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 PRO2289Q9P1D8 64 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 POLR3HQ9Y535 204 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 NUP160Q12769 1436 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 MYO3BQ8WXR4 1341 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 PTPRSQ13332 1948 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 IGLV3-9A0A075B6K5 115 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 TMED7-TICAM2A0A0A6YYA0 188 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 A0A1W2PQD3 144 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 ARRDC5A6NEK1 342 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 EVPLLA8MZ36 301 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 C9JCJ5 164 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 OVOL1O14753 267 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 LYPLA2O95372 231 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 IGKV1-16P04430 117 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 UCHL3P15374 230 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 TAS2R20P59543 309 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 AP1S1P61966 158 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 HES1Q14469 280 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 COQ5Q5HYK3 327 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 SAPCD1Q5SSQ6 148 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 CD200R1LQ6Q8B3 271 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 RASSF6Q6ZTQ3 369 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 SLC35E3Q7Z769 313 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 COMMD7Q86VX2 200 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 GPHB5Q86YW7 130 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 OR8J2Q8NGG1 315 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 OR5J2Q8NH18 312 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 RNF133Q8WVZ7 376 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 OPTNQ96CV9 577 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 SFRP2Q96HF1 295 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 HRASLSQ9HDD0 168 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 FKBP14Q9NWM8 211 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 C3orf18Q9UK00 162 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 ANAPC10Q9UM13 185 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 RTEL1-TNFRSF6BF6WH68 1400 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF532Q9HCE3 1301 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 SNAPC4Q5SXM2 1469 aa1.11□□□□□ -2.23
SCFD1-217ENST00000555953 DISP1Q96F81 1524 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 ZFYVE9O95405 1425 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 IGHV1-69-2A0A0G2JMI3 117 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 A0A0G2JQZ4 141 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 MDFIC2A0A1B0GVS7 189 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 COX7A2LO14548 114 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 ACOX3O15254 700 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 BPGMP07738 259 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 RPS12P25398 132 aaKnown RBP1.1□□□□□ -2.23
SCFD1-217ENST00000555953 EMP1P54849 157 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 EMX1Q04741 257 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-217ENST00000555953 RSU1Q15404 277 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 TPRXLQ17RH7 258 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 LRRC75BQ2VPJ9 315 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 Q6ZTI0 123 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 UMODL1-AS1Q8N2C9 162 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 OR2T27Q8NH04 317 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF675Q8TD23 568 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 RAB2BQ8WUD1 216 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 RAB8BQ92930 207 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 ITFG2Q969R8 447 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 TESCQ96BS2 214 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 GNPNAT1Q96EK6 184 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-217ENST00000555953 TAAR3PQ9P1P4 343 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 HHLA3Q9XRX5 114 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 PXDNLA1KZ92 1463 aa1.1□□□□□ -2.23
SCFD1-217ENST00000555953 MALRD1Q5VYJ5 2156 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 DOCK10Q96BY6 2186 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 TGIF2-C20orf24A0A0A6YYL0 155 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 OR4C45A6NMZ5 311 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 TXNDC9O14530 226 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 AHSA1O95433 338 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 ISG15P05161 165 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 KRT7P08729 469 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 CCL1P22362 96 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 CA5AP35218 305 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 SLCO1A2P46721 670 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 NAA20P61599 178 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 UBE2IP63279 158 aaKnown RBP1.09□□□□□ -2.23
SCFD1-217ENST00000555953 ERHP84090 104 aaKnown RBP1.09□□□□□ -2.23
SCFD1-217ENST00000555953 RELAQ04206 551 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 PRDX4Q13162 271 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 MIAQ16674 131 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 CLVS2Q5SYC1 327 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 C1orf195Q5TG92 126 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 OR10K2Q6IF99 312 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF550Q7Z398 422 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 C10orf67Q8IYJ2 551 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 SLC22A24Q8N4F4 322 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 MNS1Q8NEH6 495 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 GPR32P1Q8NGA4 272 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms