RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 THNSL2Q86YJ6 484 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 CADM3Q8N126 398 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 SLC35G3Q8N808 338 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 OR2T10Q8NGZ9 312 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 R3HDM4Q96D70 268 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 HARBI1Q96MB7 349 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 TSNAXQ99598 290 aaKnown RBP8.87□□□□□ -0.99
TMEM260-208ENST00000555905 RNF5Q99942 180 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 MGAT4CQ9UBM8 478 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 CSPG4Q6UVK1 2322 aa8.87□□□□□ -0.99
TMEM260-208ENST00000555905 ACANP16112 2415 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 C5orf51A6NDU8 294 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 HMX3A6NHT5 357 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 MARCH11A6NNE9 402 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 FAM90A9PA6NNJ1 464 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 FAM25EA8MYX2 175 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 ADAP1O75689 374 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 VDAC1P21796 283 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 CD24P25063 80 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 G6PCP35575 357 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 BCAP31P51572 246 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 HNF4GQ14541 408 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 FCN2Q15485 313 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 AANATQ16613 207 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 VMA21Q3ZAQ7 101 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 GSG1LQ6UXU4 331 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 IL17RELQ6ZVW7 336 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 H2BFWTQ7Z2G1 175 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 FAM219AQ8IW50 185 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 BCL6BQ8N143 479 aaPredicted RBP8.86□□□□□ -0.99
TMEM260-208ENST00000555905 C22orf15Q8WYQ4 148 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 LSM10Q969L4 123 aaKnown RBP8.86□□□□□ -0.99
TMEM260-208ENST00000555905 SEC22AQ96IW7 307 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 EAF1Q96JC9 268 aaPredicted RBP8.86□□□□□ -0.99
TMEM260-208ENST00000555905 RHOVQ96L33 236 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 SPIN2AQ99865 258 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 SSX3Q99909 188 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 SPIN2BQ9BPZ2 258 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 MMP24Q9Y5R2 645 aa8.86□□□□□ -0.99
TMEM260-208ENST00000555905 SOX21Q9Y651 276 aaPredicted RBP8.86□□□□□ -0.99
TMEM260-208ENST00000555905 C13orf42A0A1B0GVH6 325 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 CYSRT1A8MQ03 144 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 CCSO14618 274 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 IGKV1-5P01602 117 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 SULT1A3P0DMM9 295 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 SULT1A4P0DMN0 295 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 TMEM11P17152 192 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 HLA-GP17693 338 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 EBI3Q14213 229 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 POU2AF1Q16633 256 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 GGNBP1Q5YKI7 109 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 THOC7Q6I9Y2 204 aaKnown RBP8.85□□□□□ -0.99
TMEM260-208ENST00000555905 SSX9Q7RTT3 188 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 VKORC1L1Q8N0U8 176 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 OR5M8Q8NGP6 311 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 VSTM2AQ8TAG5 236 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 PDCD10Q9BUL8 212 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 CDC42EP3Q9UKI2 254 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 TLN2Q9Y4G6 2542 aa8.85□□□□□ -0.99
TMEM260-208ENST00000555905 A0A1B0GU03 582 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 BTBD17A6NE02 478 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 SRRM4A7MD48 611 aaKnown RBP8.84□□□□□ -0.99
TMEM260-208ENST00000555905 SNAPC5O75971 98 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 SPDEFO95238 335 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 TRAPPC2P0DI81 140 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 TRAPPC2BP0DI82 140 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 SAA1P0DJI8 122 aaPredicted RBP8.84□□□□□ -0.99
TMEM260-208ENST00000555905 UBE2KP61086 200 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 MMDQ15546 238 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 C2orf68Q2NKX9 166 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 NMSQ5H8A3 153 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 OR4A47Q6IF82 309 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 RBMS3Q6XE24 437 aaKnown RBP8.84□□□□□ -0.99
TMEM260-208ENST00000555905 OR11H7Q8NGC8 314 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 OR8H1Q8NGG4 311 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 OR4A16Q8NH70 328 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 RBMXL1Q96E39 390 aaKnown RBP8.84□□□□□ -0.99
TMEM260-208ENST00000555905 RITA1Q96K30 269 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 TMEM140Q9NV12 185 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 KIAA1456Q9P272 454 aa8.84□□□□□ -0.99
TMEM260-208ENST00000555905 NCBP2LA6PVI3 153 aaKnown RBP8.83□□□□□ -1
TMEM260-208ENST00000555905 H3BUX3 64 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 NBR2O15453 112 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 SLC25A17O43808 307 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 RBMXL2O75526 392 aaKnown RBP8.83□□□□□ -1
TMEM260-208ENST00000555905 OR2A4O95047 310 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 SIX6O95475 246 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 IGLV2-23P01705 113 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 SLC25A6P12236 298 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 SRD5A1P18405 259 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 CXCL3P19876 107 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 CYCSP99999 105 aaKnown RBP8.83□□□□□ -1
TMEM260-208ENST00000555905 SMCO1Q147U7 214 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 PLGLAQ15195 96 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 PSG5Q15238 335 aa8.83□□□□□ -1
TMEM260-208ENST00000555905 IAH1Q2TAA2 248 aaPredicted RBP8.83□□□□□ -1
TMEM260-208ENST00000555905 Q6YL49 198 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms