RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 CYB561D1Q8N8Q1 229 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 C5orf30Q96GV9 206 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 FAM210BQ96KR6 192 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 RALYQ9UKM9 306 aaKnown RBP9.73□□□□□ -0.85
SHMT2-212ENST00000554467 ZNF835Q9Y2P0 537 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 DYSFO75923 2080 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 K7N7A8 449 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TUBG1P23258 451 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TMEM183AQ8IXX5 376 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 RND1Q92730 232 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 LEAP2Q969E1 77 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TMEM56Q96MV1 263 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 PBDC1Q9BVG4 233 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TUBG2Q9NRH3 451 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 TMEM56-RWDD3S4R434 201 aa9.73□□□□□ -0.85
SHMT2-212ENST00000554467 IGLV3-9A0A075B6K5 115 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 GPR137BO60478 399 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 SCAF4O95104 1147 aaKnown RBP9.72□□□□□ -0.85
SHMT2-212ENST00000554467 IGKV1-39P01597 117 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 IGKV1D-39P04432 117 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 UCP1P25874 307 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 SELENOVP59797 346 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 EWSR1Q01844 656 aaKnown RBP eCLIP9.72□□□□□ -0.85
SHMT2-212ENST00000554467 Q6ZRM9 215 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 OR4D5Q8NGN0 318 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 OR5C1Q8NGR4 320 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 CACNA1AO00555 2505 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 ZFYVE26Q68DK2 2539 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 RAMP3O60896 148 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 ZNF737O75373 536 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 P2RY1P47900 373 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 OR2C3Q8N628 320 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 H0Y980 276 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 SLC35E4Q6ICL7 350 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 PITPNC1Q9UKF7 332 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 PSG11Q9UQ72 335 aa9.72□□□□□ -0.85
SHMT2-212ENST00000554467 OOEPA6NGQ2 149 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 RPL30P62888 115 aaKnown RBP9.71□□□□□ -0.85
SHMT2-212ENST00000554467 RPP30P78346 268 aaKnown RBP9.71□□□□□ -0.85
SHMT2-212ENST00000554467 ZNF816Q0VGE8 651 aaPredicted RBP9.71□□□□□ -0.85
SHMT2-212ENST00000554467 LY6DQ14210 128 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 ICAM4Q14773 271 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 ADIPOQQ15848 244 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 NMSQ5H8A3 153 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 OR4X1Q8NH49 305 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 LINC01560Q8TB33 94 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 NINJ1Q92982 152 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 GPR146Q96CH1 333 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 FAM234AQ9H0X4 552 aa9.71□□□□□ -0.85
SHMT2-212ENST00000554467 TMEM50AO95807 157 aa9.71□□□□□ -0.86
SHMT2-212ENST00000554467 GYPAP02724 150 aa9.71□□□□□ -0.86
SHMT2-212ENST00000554467 S100GP29377 79 aa9.71□□□□□ -0.86
SHMT2-212ENST00000554467 CDSNQ15517 529 aa9.71□□□□□ -0.86
SHMT2-212ENST00000554467 DIRC2Q96SL1 478 aa9.71□□□□□ -0.86
SHMT2-212ENST00000554467 CCL13Q99616 98 aa9.71□□□□□ -0.86
SHMT2-212ENST00000554467 IGSF23A1L1A6 192 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 M0R143 59 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 ATP6V0CP27449 155 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 RBPJQ06330 500 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 FAM90A1Q86YD7 464 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 FAM216BQ8N7L0 139 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 OR5D13Q8NGL4 314 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 PRR7Q8TB68 274 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 RAI1Q7Z5J4 1906 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-212ENST00000554467 VDAC1P21796 283 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 SRPXP78539 464 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 TMEM267Q0VDI3 215 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-212ENST00000554467 GAGE1Q13065 139 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 ZNF585BQ52M93 769 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 FLNCQ14315 2725 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 ODAMA1E959 279 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 NPIPB11E5RHQ5 1161 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 CHST1O43916 411 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 IGKV1-5P01602 117 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 CD55P08174 381 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 DYNLT3P51808 116 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 MZT1Q08AG7 82 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 PRSS8Q16651 343 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 C1orf174Q8IYL3 243 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 TVP23CQ96ET8 276 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 ELOVL5Q9NYP7 299 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 CACNG5Q9UF02 275 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 ARFGEF3Q5TH69 2177 aa9.7□□□□□ -0.86
SHMT2-212ENST00000554467 IAPPP10997 89 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 PAX5Q02548 391 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 JKAMPQ9P055 326 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 GNG12Q9UBI6 72 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 STRAPQ9Y3F4 350 aaKnown RBP9.69□□□□□ -0.86
SHMT2-212ENST00000554467 CCL21O00585 134 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 PLAUP00749 431 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 KRASP01116 189 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 RNF7Q9UBF6 113 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 LHBP01229 141 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 ERVFC1-1P60608 527 aa9.69□□□□□ -0.86
SHMT2-212ENST00000554467 RPS16P62249 146 aaKnown RBP9.69□□□□□ -0.86
SHMT2-212ENST00000554467 ARSJQ5FYB0 599 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-212ENST00000554467 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms