RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 OR1C1Q15619 314 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 IQCJQ1A5X6 159 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 RSPO1Q2MKA7 263 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM249Q2WGJ8 235 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 SP6Q3SY56 376 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 RAET1LQ5VY80 246 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 NCR3LG1Q68D85 454 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 ABLIM2Q6H8Q1 611 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 WDFY1Q8IWB7 410 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF383Q8NA42 475 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 OR10D4PQ8NGN7 298 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 NPRL2Q8WTW4 380 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 RND1Q92730 232 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM18Q96B42 140 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 IMMP1LQ96LU5 166 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 PACRGQ96M98 296 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-203ENST00000554264 SIGLEC12Q96PQ1 595 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 CIB3Q96Q77 187 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-203ENST00000554264 HIST1H2AAQ96QV6 131 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 BCL2L14Q9BZR8 327 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 PKIBQ9C010 78 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 OR2H1Q9GZK4 316 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 KCNIP2Q9NS61 270 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 SLC7A10Q9NS82 523 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 RNF115Q9Y4L5 304 aa4.96□□□□□ -1.62
VPS33B-203ENST00000554264 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 A0A087X0M5 115 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 CTXND1A0A1B0GTU2 59 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 A0A1B0GX30 115 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SLC22A20A6NK97 555 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 C17orf51A8MQB3 221 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF727A8MUV8 499 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 C17orf112F2Z3M2 114 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 TRAPPC2LH3BP13 241 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SYNGR2O43760 224 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 CHST1O43916 411 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 RAMP1O60894 148 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 KBTBD11O94819 623 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 YIF1AO95070 293 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 IGLV2-14P01704 120 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SP1P08047 785 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 TRGC1P0CF51 173 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 DAOP14920 347 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 GPX4P36969 197 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SPCS3P61009 180 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 RAB11AP62491 216 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 MEF2BQ02080 365 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-203ENST00000554264 TFF3Q07654 80 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 HAGHQ16775 308 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM241Q24JQ0 296 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 LRRC75BQ2VPJ9 315 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SNAI3Q3KNW1 292 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 CEACAM21Q3KPI0 293 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 FAM90A2PQ658T7 463 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 COLCA1Q6ZS62 124 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 AAED1Q7RTV5 226 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 RNF144BQ7Z419 303 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 RTN4RL2Q86UN3 420 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF573Q86YE8 665 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 ZDHHC23Q8IYP9 409 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF611Q8N823 705 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 WDR31Q8NA23 367 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 OR5A2Q8NGI9 324 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 OR10J5Q8NHC4 309 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 AKR7LQ8NHP1 331 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SPATA3Q8NHX4 192 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 FAM57AQ8TBR7 257 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 TMEM171Q8WVE6 324 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 NRGNQ92686 78 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 APOBEC3DQ96AK3 386 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-203ENST00000554264 FBXO17Q96EF6 278 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 RARRES2Q99969 163 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 HDHD3Q9BSH5 251 aaPredicted RBP4.95□□□□□ -1.62
VPS33B-203ENST00000554264 NDUFAF3Q9BU61 184 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 PARP12Q9H0J9 701 aaKnown RBP4.95□□□□□ -1.62
VPS33B-203ENST00000554264 LIME1Q9H400 295 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 SH2D2AQ9NP31 389 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 GLRX2Q9NS18 164 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 OR2W1Q9Y3N9 320 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 MPC1Q9Y5U8 109 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 TACC2O95359 2948 aa4.95□□□□□ -1.62
VPS33B-203ENST00000554264 IGKV1-27A0A075B6S5 117 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 IGKV3D-15A0A087WSY6 115 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 IGHV3-20A0A0C4DH32 117 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 MAP1LC3B2A6NCE7 125 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 IFITM10A6NMD0 228 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 CD300LBA8K4G0 201 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF814B7Z6K7 855 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 F6UZH7 168 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 H7BYZ3 331 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 SPRY1O43609 319 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ANGPTL7O43827 346 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 PDE6DO43924 150 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 MPDU1O75352 247 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 PGLYRP1O75594 196 aaPredicted RBP4.94□□□□□ -1.62
VPS33B-203ENST00000554264 HRASP01112 189 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 TRGC2P03986 189 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 CXCL1P09341 107 aa4.94□□□□□ -1.62
VPS33B-203ENST00000554264 ZNF32P17041 273 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms