RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	SMR3B	P02814	79 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	OCM2	P0CE71	109 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	OCM	P0CE72	109 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	PRB4	P10163	310 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	MIF	P14174	115 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ZNF3	P17036	446 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ALOX5AP	P20292	161 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	MC5R	P33032	325 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	OR3A3	P47888	321 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	GSS	P48637	474 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	RIDA	P52758	137 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	PNRC1	Q12796	327 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	MICA	Q29983	383 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	HSP90B2P	Q58FF3	399 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	CT45A1	Q5HYN5	189 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	BCL2L15	Q5TBC7	163 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ZNF691	Q5VV52	312 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	RSBN1	Q5VWQ0	802 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	LAMTOR1	Q6IAA8	161 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686		Q6ZSR3	168 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	FAM223A	Q8IWN6	122 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ZNF679	Q8IYX0	411 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ELMOD2	Q8IZ81	293 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	C15orf53	Q8NAA6	179 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	CT45A3	Q8NHU0	189 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	GRPEL2	Q8TAA5	225 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	CD300LF	Q8TDQ1	290 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	DEFB104A	Q8WTQ1	72 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ASB17	Q8WXJ9	295 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	PP6455	Q8WZ26	134 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	C10orf35	Q96D05	121 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	OR51V1	Q9H2C8	321 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	COA4	Q9NYJ1	87 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	IL20	Q9NYY1	176 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	MLX	Q9UH92	298 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	ENOPH1	Q9UHY7	261 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	VPS13B	Q7Z7G8	4022 aa		4.13	□□□□□ -1.75
ATXN3-223	ENST00000553686	IGHV3-43	A0A0B4J1X8	118 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	TRAV39	A0A0B4J263	110 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686		A0A1B0GTI1	187 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	KRTAP16-1	A8MUX0	517 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	FAM220BP	B1ANY3	271 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	C15orf65	H3BRN8	121 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686		H7C423	109 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	SLC31A2	O15432	143 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	GADD45G	O95257	159 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	FADS2	O95864	444 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CA1	P00915	261 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CA2	P00918	260 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	IGHV3-43D	P0DP04	118 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	DBT	P11182	482 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	MED21	Q13503	144 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	EXOSC2	Q13868	293 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	BTNL8	Q6UX41	500 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	SAXO1	Q8IYX7	474 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686		Q8NAQ8	132 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	OR2T33	Q8NG76	320 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CNIH3	Q8TBE1	160 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CACNG8	Q8WXS5	425 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	SULT4A1	Q9BR01	284 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	ATG101	Q9BSB4	218 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CHRDL1	Q9BU40	450 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CENPO	Q9BU64	300 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	TSSK6	Q9BXA6	273 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	MRPL20	Q9BYC9	149 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	YIPF3	Q9GZM5	350 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CHST5	Q9GZS9	411 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	C5orf66	Q9H5L9	145 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	NEK6	Q9HC98	313 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	IL1RAP	Q9NPH3	570 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	CMC2	Q9NRP2	79 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	MRPL27	Q9P0M9	148 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	METTL1	Q9UBP6	276 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	ING4	Q9UNL4	249 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	AP3M1	Q9Y2T2	418 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	SELENOK	Q9Y6D0	94 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	TMEM14A	Q9Y6G1	99 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	AGRN	O00468	2067 aa		4.12	□□□□□ -1.75
ATXN3-223	ENST00000553686	TRAV24	A0A0B4J272	114 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	TMEM30CP	A0ZSE6	113 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	CTDSP2	O14595	271 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	ARPC2	O15144	300 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	SYT7	O43581	403 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	SELENOF	O60613	162 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	MRPS14	O60783	128 aa	Known RBP	4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	OXT	P01178	125 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	GSTT2	P0CG29	244 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	GSTT2B	P0CG30	244 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	RHOG	P84095	191 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	CDK5R1	Q15078	307 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	ZSCAN26	Q16670	478 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	C12orf74	Q32Q52	190 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	TMEM41B	Q5BJD5	291 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	SLC25A30	Q5SVS4	291 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	GLT8D1	Q68CQ7	371 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	FAAP20	Q6NZ36	180 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	RASSF6	Q6ZTQ3	369 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	SERPINA12	Q8IW75	414 aa		4.11	□□□□□ -1.75
ATXN3-223	ENST00000553686	ZNF439	Q8NDP4	499 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms