RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 LPAR6P43657 344 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 MECP2P51608 486 aaKnown RBP7.81□□□□□ -1.16
TMEM260-204ENST00000553335 RPS16P62249 146 aaKnown RBP7.81□□□□□ -1.16
TMEM260-204ENST00000553335 C21orf62-AS1Q17RA5 79 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 TRIM16LQ309B1 348 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 C4orf46Q504U0 113 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM177Q53S58 311 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM86BQ8N661 226 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 OSR1Q8TAX0 266 aaPredicted RBP7.81□□□□□ -1.16
TMEM260-204ENST00000553335 GALNT14Q96FL9 552 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 MARVELD1Q9BSK0 173 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 GPN1Q9HCN4 374 aaPredicted RBP7.81□□□□□ -1.16
TMEM260-204ENST00000553335 C1RLQ9NZP8 487 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 TCF19Q9Y242 345 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 POMT1Q9Y6A1 747 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 SFT2D2O95562 160 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 CRYZL1O95825 349 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 HRASP01112 189 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 IGHV4-59P01825 116 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 HLA-AP01891 365 aaKnown RBP7.8□□□□□ -1.16
TMEM260-204ENST00000553335 IL5P05113 134 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 OR5AC1P0C628 307 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 CD24P25063 80 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 UCP1P25874 307 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 LGALS7P47929 136 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 SUMO1P63165 101 aaKnown RBP7.8□□□□□ -1.16
TMEM260-204ENST00000553335 SRPXP78539 464 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 PPP1R1AQ13522 171 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 LY6EQ16553 131 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 C16orf82Q7Z2V1 217 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 LYG2Q86SG7 212 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 OR8H1Q8NGG4 311 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 PIFOQ8TCI5 191 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 HARBI1Q96MB7 349 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 CCDC140Q96MF4 163 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 TP53RKQ96S44 253 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 TSNAXQ99598 290 aaKnown RBP7.8□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM222Q9H0R3 208 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 PLEKHA2Q9HB19 425 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 BEX1Q9HBH7 125 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 COMMD9Q9P000 198 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 KIAA1456Q9P272 454 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
TMEM260-204ENST00000553335 A0A0A6YYJ9 748 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 C9orf170A2RU37 121 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 RAMP3O60896 148 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 OR2F2O95006 317 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 S1PR2O95136 353 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 SPDEFO95238 335 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 IGKV1-16P04430 117 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 NQO2P16083 231 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 SPNP16150 400 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 RAB25P57735 213 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 BRWD1-AS2P59051 145 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 ERVK-16P61578 105 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 SUPT4H1P63272 117 aaKnown RBP7.79□□□□□ -1.16
TMEM260-204ENST00000553335 DHRS2Q13268 280 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 HNF4GQ14541 408 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM187Q14656 261 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 OXA1LQ15070 435 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 MMDQ15546 238 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 SLC9A3R2Q15599 337 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 SP6Q3SY56 376 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 ZNF585BQ52M93 769 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 TM4SF20Q53R12 229 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 ZNF695Q8IW36 515 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 LGI3Q8N145 548 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 COQ8AQ8NI60 647 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 VSTM2AQ8TAG5 236 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 CASTOR1Q8WTX7 329 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 GLYATL2Q8WU03 294 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 CHPT1Q8WUD6 406 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 IL22RA2Q969J5 263 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 R3HDM4Q96D70 268 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 RBM14Q96PK6 669 aaKnown RBP7.79□□□□□ -1.16
TMEM260-204ENST00000553335 SLC25A33Q9BSK2 321 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 RAB18Q9NP72 206 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 TNFRSF19Q9NS68 423 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 VPREB3Q9UKI3 123 aa7.79□□□□□ -1.16
TMEM260-204ENST00000553335 HIVEP2P31629 2446 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 A6NDX4 124 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
TMEM260-204ENST00000553335 M0QZK8 103 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 NBR2O15453 112 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 TCF21O43680 179 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 DUS4LO95620 317 aaKnown RBP7.78□□□□□ -1.16
TMEM260-204ENST00000553335 CDS2O95674 445 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 ADMP35318 185 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 AKR1C2P52895 323 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 HILS1P60008 231 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 PLGLAQ15195 96 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM268Q5VZI3 342 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 Q8N6K4 173 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 DMBX1Q8NFW5 382 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 NPBQ8NG41 125 aa7.78□□□□□ -1.16
TMEM260-204ENST00000553335 RNASE11Q8TAA1 199 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms