RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 TRAV25A0A0B4J276 109 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 KIR2DL5BA0A0G2JN68 375 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 KIR2DL5BA0A0G2JPC4 375 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 SOCS1O15524 211 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 MED14OSP0DP75 135 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 MYL12AP19105 171 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 ARL3P36405 182 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 C1orf100Q5SVJ3 147 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 C19orf35Q6ZS72 473 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 KIR2DL5AQ8N109 375 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 GGHQ92820 318 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 UBQLN2Q9UHD9 624 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 S4R3C0 116 aa9.42□□□□□ -0.9
SCAF11-208ENST00000546534 VPS13DQ5THJ4 4388 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 A0A1B0GVY2 172 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 HMX3A6NHT5 357 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 TMEM14DPA8MWL7 114 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 CRYZL1O95825 349 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 CD3GP09693 182 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 RRASP10301 218 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 CTRB1P17538 263 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 MAP2K4P45985 399 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 NANOS2P60321 138 aaKnown RBP9.41□□□□□ -0.9
SCAF11-208ENST00000546534 QRFPP83859 136 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 CTRB2Q6GPI1 263 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
SCAF11-208ENST00000546534 OR2C3Q8N628 320 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 C12orf4Q9NQ89 552 aa9.41□□□□□ -0.9
SCAF11-208ENST00000546534 TRDCB7Z8K6 153 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 BET1O15155 118 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 ACTL6BO94805 426 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 SAA1P0DJI8 122 aaPredicted RBP9.4□□□□□ -0.9
SCAF11-208ENST00000546534 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 RPL35AP18077 110 aaKnown RBP9.4□□□□□ -0.9
SCAF11-208ENST00000546534 SRMP19623 302 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
SCAF11-208ENST00000546534 TAS2R43P59537 309 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 INSL4Q14641 139 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 RBMS2Q15434 407 aaKnown RBP9.4□□□□□ -0.9
SCAF11-208ENST00000546534 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 GLT8D1Q68CQ7 371 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 CEACAM19Q7Z692 300 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 LRRTM1Q86UE6 522 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 SLC25A42Q86VD7 318 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 SLC38A6Q8IZM9 456 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 LPAR5Q9H1C0 372 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 FBXL17Q9UF56 701 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 ZNF257Q9Y2Q1 563 aa9.4□□□□□ -0.9
SCAF11-208ENST00000546534 IRGMA1A4Y4 181 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 TEX22C9J3V5 150 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 S1PR2O95136 353 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 IFNA4P05014 189 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 CELP19835 753 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 MAPK3P27361 379 aaPredicted RBP9.39□□□□□ -0.91
SCAF11-208ENST00000546534 SERPINB10P48595 397 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 TMEM50BP56557 158 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 CDK10Q15131 360 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 IGSF11Q5DX21 431 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 OSR1Q8TAX0 266 aaPredicted RBP9.39□□□□□ -0.91
SCAF11-208ENST00000546534 TMEM80Q96HE8 168 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 CMSS1Q9BQ75 279 aaKnown RBP9.39□□□□□ -0.91
SCAF11-208ENST00000546534 KRTAP4-5Q9BYR2 181 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 MAP6D1Q9H9H5 199 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 HSF4Q9ULV5 492 aa9.39□□□□□ -0.91
SCAF11-208ENST00000546534 LINC00473A8K010 186 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 FOXI3A8MTJ6 420 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-208ENST00000546534 CD1AP06126 327 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 DUTP33316 252 aaKnown RBP9.38□□□□□ -0.91
SCAF11-208ENST00000546534 MED21Q13503 144 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 TPBGQ13641 420 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 TTC23Q5W5X9 447 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 OR4A4PQ8NGN8 299 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 MARC2Q969Z3 335 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 ARHGAP5-AS1Q96IT6 56 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 SPAG8Q99932 426 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-208ENST00000546534 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
SCAF11-208ENST00000546534 MFFQ9GZY8 342 aa9.38□□□□□ -0.91
SCAF11-208ENST00000546534 MRPL27Q9P0M9 148 aaKnown RBP9.38□□□□□ -0.91
SCAF11-208ENST00000546534 NPIPB5A8MRT5 1133 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 E7EUB6 86 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 FABP7O15540 132 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 XRCC3O43542 346 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 CREBL2O60519 120 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-208ENST00000546534 CIB2O75838 187 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 CLEC3BP05452 202 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-208ENST00000546534 CD37P11049 281 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 TCTAP57738 103 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 ACSM3Q53FZ2 586 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms