RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TRGV10A0A0A0MS01 117 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 IGHV3-64DA0A0J9YX35 117 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 GGCTO75223 188 aaKnown RBP10.82□□□□□ -0.68
CPSF7-223ENST00000544669 GYPAP02724 150 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 FTH1P19P0C7X4 201 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 TIMP3P35625 211 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 RNASEH2CQ8TDP1 164 aaKnown RBP10.82□□□□□ -0.68
CPSF7-223ENST00000544669 ABHD5Q8WTS1 349 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 MEGF10Q96KG7 1140 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 C19orf24Q9BVV8 132 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 CALYQ9NYX4 217 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 DKK4Q9UBT3 224 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 IL19Q9UHD0 177 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 DUSP13Q9UII6 198 aa10.82□□□□□ -0.68
CPSF7-223ENST00000544669 IGLV3-9A0A075B6K5 115 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 IGHV3-43A0A0B4J1X8 118 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 DVL1O14640 695 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 IGHV3-43DP0DP04 118 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 HIST1H1BP16401 226 aaKnown RBP10.81□□□□□ -0.68
CPSF7-223ENST00000544669 VDAC2P45880 294 aaPredicted RBP10.81□□□□□ -0.68
CPSF7-223ENST00000544669 LOXL3P58215 753 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 HSPE1P61604 102 aaKnown RBP10.81□□□□□ -0.68
CPSF7-223ENST00000544669 RELBQ01201 579 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 TFF3Q07654 80 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 FOXL1Q12952 345 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 POU2AF1Q16633 256 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 OR10D4PQ8NGN7 298 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 FAM222BQ8WU58 562 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 SDSLQ96GA7 329 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 RNF7Q9UBF6 113 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 PRNDQ9UKY0 176 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
CPSF7-223ENST00000544669 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 KBTBD11-OT1A0A1B0GTJ5 212 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 DEFB108AA8MXU0 73 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 OR9G9P0C7N8 305 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 STAG3L2P0CL84 134 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 STAG3L3P0CL85 134 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 CGB3P0DN86 165 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 CGB7P0DN87 165 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 RHOBP62745 196 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 RTL8BQ17RB0 113 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 TEPPQ6URK8 271 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 OR5R1Q8NH85 324 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 OR2V2Q96R30 315 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 OPN3Q9H1Y3 402 aaPredicted RBP10.81□□□□□ -0.68
CPSF7-223ENST00000544669 LINC00574Q9H8X3 128 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 LY96Q9Y6Y9 160 aa10.81□□□□□ -0.68
CPSF7-223ENST00000544669 C15orf61A6NNL5 157 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 PHOX2AO14813 284 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 GALR2O43603 387 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-223ENST00000544669 GFRA3O60609 400 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 IRF2P14316 349 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 RPL29P47914 159 aaKnown RBP10.8□□□□□ -0.68
CPSF7-223ENST00000544669 EDDM3BP56851 147 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 KRTCAP3Q53RY4 240 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 PYY3Q5JQD4 70 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 TREML4Q6UXN2 200 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 SPNS3Q6ZMD2 512 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 TPRX1Q8N7U7 411 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 OR4X1Q8NH49 305 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 TMEM170AQ8WVE7 144 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 DDB2Q92466 427 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 UHRF2Q96PU4 802 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 CNTRLQ7Z7A1 2325 aa10.8□□□□□ -0.68
CPSF7-223ENST00000544669 TSTD3H0UI37 97 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 CCKARP32238 428 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 DEFB109BQ30KR1 87 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 Q8TCH9 128 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 PACRGQ96M98 296 aaPredicted RBP10.79□□□□□ -0.68
CPSF7-223ENST00000544669 GPR61Q9BZJ8 451 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 FZR1Q9UM11 496 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 TCF19Q9Y242 345 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 PXMP4Q9Y6I8 212 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 A8MXE2 369 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 VSTM5A8MXK1 200 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 M0R1B8 84 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 GCGP01275 180 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 SOD3P08294 240 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 PDLIM4P50479 330 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 TLE1Q04724 770 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 CST9LP1Q5W188 147 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 MOGAT3Q86VF5 341 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 OR1P1Q8NH06 330 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 ZNF407Q9C0G0 2248 aa10.79□□□□□ -0.68
CPSF7-223ENST00000544669 IFITM10A6NMD0 228 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 EGR1P18146 543 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 NPY1RP25929 384 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 ZNF83P51522 516 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 PKIAP61925 76 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 MRPS11P82912 194 aaKnown RBP10.78□□□□□ -0.68
CPSF7-223ENST00000544669 DEFB124Q8NES8 71 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 SLC24A4Q8NFF2 622 aa10.78□□□□□ -0.68
CPSF7-223ENST00000544669 TMEM18Q96B42 140 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms