RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR5D14Q8NGL3 314 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 OR13C9Q8NGT0 318 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 KCNG3Q8TAE7 436 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 FRZBQ92765 325 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 FGGYQ96C11 551 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ADAT3Q96EY9 351 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RRNAD1Q96FB5 475 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 NSMCE2Q96MF7 247 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 YPEL2Q96QA6 119 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 NIPSNAP1Q9BPW8 284 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 PRRG3Q9BZD7 231 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 PARP12Q9H0J9 701 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 C5orf66Q9H5L9 145 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 RNF167Q9H6Y7 350 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 REEP1Q9H902 201 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF556Q9HAH1 456 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SAR1AQ9NR31 198 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 PAK1IP1Q9NWT1 392 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 KCNIP1Q9NZI2 227 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 MRPL27Q9P0M9 148 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 MLXQ9UH92 298 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 UBQLN2Q9UHD9 624 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF230Q9UIE0 474 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 ST3GAL6Q9Y274 331 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 EXOSC1Q9Y3B2 195 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 SAMHD1Q9Y3Z3 626 aaKnown RBP2.96□□□□□ -1.94
SNHG1-220ENST00000544550 GMPPBQ9Y5P6 360 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 PKD1P98161 4303 aa2.96□□□□□ -1.94
SNHG1-220ENST00000544550 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 DEFB131BA0A096LNP1 70 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 RPS10-NUDT3A0A1W2PQS6 291 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF320A2RRD8 509 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM213A2RRL7 107 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 CCDC182A6NF36 153 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 MCRIP1C9JLW8 97 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF780AO75290 641 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-220ENST00000544550 OR9G9P0C7N8 305 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 OR2T7P0C7T2 308 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 CT45A6P0DMU7 189 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 CT45A5P0DMU8 189 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 CT45A7P0DMV0 189 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 MIFP14174 115 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 ATP6V1B2P21281 511 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 GALP22466 123 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 NPY1RP25929 384 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 HLA-DMBP28068 263 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 RBM11P57052 281 aaKnown RBP2.95□□□□□ -1.94
SNHG1-220ENST00000544550 PSME3P61289 254 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 RHOGP84095 191 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 ZSCAN26Q16670 478 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 PIGYQ3MUY2 71 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM41BQ5BJD5 291 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 SLC25A30Q5SVS4 291 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 Q5VSD8 79 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 ASCL4Q6XD76 172 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 PQLC2Q6ZP29 291 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 PDPNQ86YL7 162 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 NECAP1Q8NC96 275 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 OR13C3Q8NGS6 347 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 OR52N1Q8NH53 320 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 OR1L1Q8NH94 360 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 CD300LFQ8TDQ1 290 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 TNFAIP8L1Q8WVP5 186 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 CACNG8Q8WXS5 425 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 PELI1Q96FA3 418 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 FAM210BQ96KR6 192 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 HARBI1Q96MB7 349 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 GPER1Q99527 375 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 S100A13Q99584 98 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 SRSF8Q9BRL6 282 aaKnown RBP2.95□□□□□ -1.94
SNHG1-220ENST00000544550 FAM192AQ9GZU8 254 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 METTL9Q9H1A3 318 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 ADGRL4Q9HBW9 690 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 TMBIM4Q9HC24 238 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 PTTG2Q9NZH5 202 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 IL36GQ9NZH8 169 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 UFC1Q9Y3C8 167 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 LRRC42Q9Y546 428 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 DSCAML1Q8TD84 2053 aa2.95□□□□□ -1.94
SNHG1-220ENST00000544550 TRBV9A0A0B4J1U6 114 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 IGHV4-28A0A0C4DH34 117 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 C15orf61A6NNL5 157 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 PPP5D1E7EU14 171 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 H3BNX3 289 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 VCYO14598 125 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GEMIN2O14893 280 aaKnown RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 DEFB4AO15263 64 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 MAGEB4O15481 346 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 CREBL2O60519 120 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 MRPS14O60783 128 aaKnown RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GPX5O75715 221 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 TOMM40O96008 361 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 CA1P00915 261 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 APOA2P02652 100 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 C8orf88P0DMB2 117 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 COX4I1P13073 169 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 GTF2F2P13984 249 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 HSD17B1P14061 328 aa2.94□□□□□ -1.94
SNHG1-220ENST00000544550 PPP1CCP36873 323 aaKnown RBP2.94□□□□□ -1.94
SNHG1-220ENST00000544550 CAMPP49913 170 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms