RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 ZNRD1Q9P1U0 126 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 MGAT4CQ9UBM8 478 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 NUP50Q9UKX7 468 aa7.68□□□□□ -1.18
YBX3-215ENST00000544504 KMT2CQ8NEZ4 4911 aaKnown RBP7.68□□□□□ -1.18
YBX3-215ENST00000544504 A0A1B0GU03 582 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 A0A1B0GVG6 124 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 A0A1W2PPI3 338 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 A0A1W2PRD5 423 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 A0A1W2PRF3 423 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 A0A1W2PRM7 423 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 C5orf51A6NDU8 294 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 SHOXO15266 292 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 CRYZL1O95825 349 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 SLC25A6P12236 298 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 REG1BP48304 166 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 DYNLT3P51808 116 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 DLX1P56177 255 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 RAP2BP61225 183 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 SSX2Q16385 188 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 AANATQ16613 207 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 ZNF585BQ52M93 769 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 OR2B11Q5JQS5 317 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 H2BFWTQ7Z2G1 175 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 AKAP14Q86UN6 197 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 THNSL2Q86YJ6 484 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 PDZD9Q8IXQ8 264 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 SELENOHQ8IZQ5 122 aaKnown RBP7.67□□□□□ -1.18
YBX3-215ENST00000544504 SLC35G3Q8N808 338 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 VSTM2AQ8TAG5 236 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 R3HDM4Q96D70 268 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 GPHA2Q96T91 129 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 PDCD10Q9BUL8 212 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 MS4A7Q9GZW8 240 aaPredicted RBP7.67□□□□□ -1.18
YBX3-215ENST00000544504 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 HILPDAQ9Y5L2 63 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 MMP24Q9Y5R2 645 aa7.67□□□□□ -1.18
YBX3-215ENST00000544504 RYR3Q15413 4870 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 MARCH11A6NNE9 402 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 VGLL3A8MV65 326 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 GOSR2O14653 212 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 TIMM23O14925 209 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 RAMP3O60896 148 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 PFDN1O60925 122 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 S1PR2O95136 353 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 SPDEFO95238 335 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 FSHBP01225 129 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 FGF2P09038 288 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 HOXB5P09067 269 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 GIPP09681 153 aaPredicted RBP7.66□□□□□ -1.18
YBX3-215ENST00000544504 FAM106CPP0CH98 169 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 RPS16P62249 146 aaKnown RBP7.66□□□□□ -1.18
YBX3-215ENST00000544504 PRB3Q04118 309 aaPredicted RBP7.66□□□□□ -1.18
YBX3-215ENST00000544504 FCN2Q15485 313 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 POU2AF1Q16633 256 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 VMA21Q3ZAQ7 101 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 PRR31Q5SQ13 230 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 GGNBP1Q5YKI7 109 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 C1orf229Q6ZS94 237 aaPredicted RBP7.66□□□□□ -1.18
YBX3-215ENST00000544504 C9orf139Q6ZV77 190 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 LHFPL4Q7Z7J7 247 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 DMBX1Q8NFW5 382 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 OR8H1Q8NGG4 311 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 OR2T10Q8NGZ9 312 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 OR4A5Q8NH83 315 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 RHOVQ96L33 236 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 C2orf50Q96LR7 162 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 HARBI1Q96MB7 349 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 ZNF436Q9C0F3 470 aaPredicted RBP7.66□□□□□ -1.18
YBX3-215ENST00000544504 MEGF9Q9H1U4 602 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 C1RLQ9NZP8 487 aa7.66□□□□□ -1.18
YBX3-215ENST00000544504 C13orf42A0A1B0GVH6 325 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 FAM25EA8MYX2 175 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 CCNKO75909 580 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 SNAPC5O75971 98 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 OR2A4O95047 310 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 MOSP00540 346 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 KRASP01116 189 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 AVPP01185 164 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 PET100P0DJ07 73 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 IGHV4-38-2P0DP08 117 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 DEFA6Q01524 100 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 FGL1Q08830 312 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 DIAPH2-AS1Q14236 149 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 SMCO1Q147U7 214 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 IAH1Q2TAA2 248 aaPredicted RBP7.65□□□□□ -1.18
YBX3-215ENST00000544504 NMSQ5H8A3 153 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 KLF17Q5JT82 389 aaPredicted RBP7.65□□□□□ -1.18
YBX3-215ENST00000544504 LYZL2Q7Z4W2 148 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 PIP4P2Q8N4L2 257 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 OR11H7Q8NGC8 314 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 LHFPL5Q8TAF8 219 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 CFHR4Q92496 578 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 SEC22AQ96IW7 307 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 OR2A7Q96R45 310 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 NMES1Q9C002 83 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 COA4Q9NYJ1 87 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 FKBP11Q9NYL4 201 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 BET1LQ9NYM9 111 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 PITPNC1Q9UKF7 332 aa7.65□□□□□ -1.18
YBX3-215ENST00000544504 FAM90A26D6RGX4 464 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms