RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 Q6ZS49 121 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 SAXO1Q8IYX7 474 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 IMMP2LQ96T52 175 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 PCGF1Q9BSM1 259 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 FZR1Q9UM11 496 aa12.56□□□□□ -0.4
CHFR-223ENST00000544268 YLPM1P49750 1951 aaKnown RBP12.56□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A10PA6NDY2 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A18PA6NE21 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A16PA6NEW6 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A20PA6NIJ5 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A8PA6NJQ4 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A7PA6NKC0 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A22PA8MWA6 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A12PA8MX19 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A5PA8MXJ8 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A23PA8MXZ1 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A15PP0C7V4 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A13PP0C7W8 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A14PP0C7W9 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 FAM90A24PP0C7X0 464 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 ZNF16P17020 682 aaPredicted RBP12.55□□□□□ -0.4
CHFR-223ENST00000544268 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
CHFR-223ENST00000544268 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
CHFR-223ENST00000544268 Q6P435 159 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 ZNF826PQ6ZT77 177 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 NECAP1Q8NC96 275 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 MS4A10Q96PG2 267 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 AGMATQ9BSE5 352 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 OR6C3Q9NZP0 311 aa12.55□□□□□ -0.4
CHFR-223ENST00000544268 H7BYZ3 331 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 DEGS1O15121 323 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 AGFG2O95081 481 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 OR2H2O95918 312 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 GRPP07492 148 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 BAXQ07812 192 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 ADIRFQ15847 76 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 C1orf122Q6ZSJ8 110 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 SSX7Q7RTT5 188 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 C1orf162Q8NEQ5 155 aaPredicted RBP12.54□□□□□ -0.4
CHFR-223ENST00000544268 RNF115Q9Y4L5 304 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
CHFR-223ENST00000544268 KIR2DS1A0A191URI9 304 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 WNT9BO14905 357 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 HRASP01112 189 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 TYMSP04818 313 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 F2RP25116 425 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 KIR2DS4P43632 304 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 ID3Q02535 119 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 KIR2DS1Q14954 304 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 TESK1Q15569 626 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 ZNF787Q6DD87 383 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 ZNF474Q6S9Z5 364 aaPredicted RBP12.54□□□□□ -0.4
CHFR-223ENST00000544268 CYP2G1PQ6ZSU1 146 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 ZNF665Q9H7R5 613 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 OR2W1Q9Y3N9 320 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 PCNX1Q96RV3 2341 aa12.54□□□□□ -0.4
CHFR-223ENST00000544268 MAP1LC3B2A6NCE7 125 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 NKX6-3A6NJ46 265 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 IAPPP10997 89 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 VDAC1P21796 283 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 CDC34P49427 236 aaPredicted RBP12.53□□□□□ -0.4
CHFR-223ENST00000544268 RAB7AP51149 207 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 IL24Q13007 206 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 MRPL49Q13405 166 aaKnown RBP12.53□□□□□ -0.4
CHFR-223ENST00000544268 TBC1D28Q2M2D7 210 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 MBD3L1Q8WWY6 194 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 ABHD14BQ96IU4 210 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 MAP1LC3BQ9GZQ8 125 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 CSTL1Q9H114 145 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
CHFR-223ENST00000544268 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 USF3Q68DE3 2245 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 ITPR1Q14643 2758 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 ADGRG4Q8IZF6 3080 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 CBY3A6NI87 242 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 MPV17P39210 176 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 PTTG1IPP53801 180 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 LINC00205P59089 165 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 BATFQ16520 125 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 BSXQ3C1V8 233 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 TEX43Q6ZNM6 134 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 RNF150Q9ULK6 438 aa12.53□□□□□ -0.4
CHFR-223ENST00000544268 CADP27708 2225 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 C20orf202A1L168 122 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 SELENOTP62341 195 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 BHLHA15Q7RTS1 189 aaPredicted RBP12.52□□□□□ -0.4
CHFR-223ENST00000544268 MRGPRGQ86SM5 289 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 SLC25A40Q8TBP6 338 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 SDSLQ96GA7 329 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 WFIKKN1Q96NZ8 548 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 ATP5SQ99766 215 aa12.52□□□□□ -0.4
CHFR-223ENST00000544268 SMIM7Q9BQ49 75 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms