RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	LHFPL2	Q6ZUX7	228 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	FAM57B	Q71RH2	274 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	MRPL52	Q86TS9	123 aa	Known RBP	5.21	□□□□□ -1.58
CIT-213	ENST00000543324	FAM24B	Q8N5W8	94 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324		Q8N7P7	452 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	MARCH1	Q8TCQ1	289 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.21	□□□□□ -1.58
CIT-213	ENST00000543324	CASTOR1	Q8WTX7	329 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	LRRC29	Q8WV35	223 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	TECTB	Q96PL2	329 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	SSX3	Q99909	188 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	RSRP1	Q9BUV0	290 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	OR10A2	Q9H208	303 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	C5orf66	Q9H5L9	145 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	OR2S2	Q9NQN1	319 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	TAS2R4	Q9NYW5	299 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	FBXL17	Q9UF56	701 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	HHLA2	Q9UM44	414 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	KCNIP3	Q9Y2W7	256 aa		5.21	□□□□□ -1.58
CIT-213	ENST00000543324	HMCN2	Q8NDA2	5059 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	FAT2	Q9NYQ8	4349 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	IGKV1D-17	A0A075B6S4	117 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	IGHV3OR15-7	A0A075B7D8	119 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324		A0A087X0M5	115 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	C13orf42	A0A1B0GVH6	325 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324		A0A1B0GX30	115 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324		A0A1W2PPE2	198 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	TMEM14DP	A8MWL7	114 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324		B4DEV8	164 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	CA11	O75493	328 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	DEDD	O75618	318 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	YIF1A	O95070	293 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	TTR	P02766	147 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	GRP	P07492	148 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	H2BFM	P0C1H6	154 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	AKR1C4	P17516	323 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	NDUFB7	P17568	137 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	VAMP1	P23763	118 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	RPL12	P30050	165 aa	Known RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	FCGR2C	P31995	323 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	HRH1	P35367	487 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	IER3	P46695	156 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	P2RY1	P47900	373 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	OR2B8P	P59922	312 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	NUTF2	P61970	127 aa	Known RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	SUPT4H1	P63272	117 aa	Known RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	MFGE8	Q08431	387 aa	Predicted RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	PRDX4	Q13162	271 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	RSU1	Q15404	277 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	RBMY1F	Q15415	496 aa	Known RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	GPR157	Q5UAW9	335 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	HCP5	Q6MZN7	132 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	ZNF529	Q6P280	563 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	C1orf122	Q6ZSJ8	110 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	FAM71E2	Q8N5Q1	922 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	FAM216B	Q8N7L0	139 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	SCCPDH	Q8NBX0	429 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	OR4S1	Q8NGB4	309 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	OR10G4	Q8NGN3	311 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	EMG1	Q92979	244 aa	Known RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	ISOC2	Q96AB3	205 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	AJUBA	Q96IF1	538 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	FAM71F1	Q96KD3	344 aa	Predicted RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	OR10C1	Q96KK4	312 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	GAFA1	Q96PS6	74 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	PCGF1	Q9BSM1	259 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	DCTN5	Q9BTE1	182 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	NDUFAF3	Q9BU61	184 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	RTL8A	Q9BWD3	113 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.2	□□□□□ -1.58
CIT-213	ENST00000543324	OR51I2	Q9H344	312 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	HES4	Q9HCC6	221 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	C19orf12	Q9NSK7	152 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324	ZNRD1	Q9P1U0	126 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324		R4GMQ9	66 aa		5.2	□□□□□ -1.58
CIT-213	ENST00000543324		A0A0U1RQK1	487 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	ZNF816-ZNF321P	A0A0X1KG74	233 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	TMEM269	A0A1B0GVZ9	245 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	DHRS7C	A6NNS2	312 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	ZNF850	A8MQ14	1090 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324		E5RGE8	158 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324		K7EPK0	472 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324		K7N7A8	449 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	CDIPT	O14735	213 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	PPP1R2P9	O14990	202 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	GPR137B	O60478	399 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BK	O60814	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	RHBDL1	O75783	438 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BJ	P06899	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	FGF7	P21781	194 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	CCL1	P22362	96 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BO	P23527	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BB	P33778	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	AKR1C3	P42330	323 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	RPS10	P46783	165 aa	Known RBP	5.19	□□□□□ -1.58
CIT-213	ENST00000543324	RND2	P52198	227 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	NDUFA6	P56556	154 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BD	P58876	126 aa		5.19	□□□□□ -1.58
CIT-213	ENST00000543324	HIST1H2BC	P62807	126 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms