RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 TMEM70Q9BUB7 260 aa5.4□□□□□ -1.55
DMD-228ENST00000541735 MAP1LC3AQ9H492 121 aa5.4□□□□□ -1.55
DMD-228ENST00000541735 A0A096LPF7 62 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 RAMP1O60894 148 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 PPIFP30405 207 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 SLC25A1P53007 311 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 BSXQ3C1V8 233 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ARRDC1Q8N5I2 433 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 OR4D5Q8NGN0 318 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 SP7Q8TDD2 431 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 ISOC2Q96AB3 205 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 DUSP21Q9H596 190 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ZMAT4Q9H898 229 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 MRM2Q9UI43 246 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 ANKRD36CQ5JPF3 1778 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ANKRD20A5PA0PJZ0 165 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 NDUFA2O43678 99 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 THBDP07204 575 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 PEBP1P30086 187 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 SRSF6Q13247 344 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 DNM1P46Q6ZS02 220 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 REC114Q7Z4M0 266 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ZFP30Q9Y2G7 519 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 TCRBV16S1A1N1A0A5B0 115 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 MBD3L4A6NDZ8 208 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 MBD3L3A6NE82 208 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 MBD3L5A6NJ08 208 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 C17orf51A8MQB3 221 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 C1QAP02745 245 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 RCC1P18754 421 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 UNC119Q13432 240 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ACTL10Q5JWF8 245 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 SAMD13Q5VXD3 122 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 WDR82Q6UXN9 313 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 PQLC2Q6ZP29 291 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 MBD3L2Q8NHZ7 208 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 RNASE6Q93091 150 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 Q9N2K0 584 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 F5H768 121 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 BGLAPP02818 100 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 BTG1P62324 171 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ATG4DQ86TL0 474 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 LINC01465Q8N7H1 131 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ZNF48Q96MX3 618 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 SETD1AO15047 1707 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 KCNE1BA0A087WTH5 132 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 A0A0G2JMM0 328 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 A0A1W2PPB8 328 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 DUXBA0A1W2PPF3 345 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 A0A1W2PRS3 328 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ADARB2-AS1A8MUL3 147 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 KIR3DP1A8MWS1 328 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 FOXS1O43638 330 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 NDUFA3O95167 84 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 ASIPP42127 132 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 CKS1BP61024 79 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 LSM6P62312 80 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 FOXD3Q9UJU5 478 aaPredicted RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 POLR2AP24928 1970 aaKnown RBP5.39□□□□□ -1.55
DMD-228ENST00000541735 ARFGEF3Q5TH69 2177 aa5.39□□□□□ -1.55
DMD-228ENST00000541735 TRGV1A0A0A0MS02 117 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 TRBV5-4A0A0C4DH59 114 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 C5orf67F2Z3F1 127 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 CELA3BP08861 270 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 HOXD3P31249 432 aaPredicted RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 GP2P55259 537 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 Q0VFX4 171 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 TCF23Q7RTU1 214 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 GCSAMQ8N6F7 178 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 COX14Q96I36 57 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 RHOVQ96L33 236 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 MANBALQ9NQG1 85 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 CBLN4Q9NTU7 201 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 ST6GALNAC2Q9UJ37 374 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 TCF20Q9UGU0 1960 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 TRAV8-6A0A0B4J262 113 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 H0YL77 283 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 CCL3L1P16619 93 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 RUNX1Q01196 453 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 CEACAM21Q3KPI0 293 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 ZNF645Q8N7E2 425 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 LSM10Q969L4 123 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 DPM3Q9P2X0 92 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.38□□□□□ -1.551e-6■■■□□ 16.4
DMD-228ENST00000541735 MCM3APO60318 1980 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 LINC00158P58513 81 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 LINC00305Q7Z4B0 112 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 ATP5LO75964 103 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 IGLV2-23P01705 113 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 RBM11P57052 281 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 C1QTNF12Q5T7M4 302 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 ZNF430Q9H8G1 570 aaPredicted RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 A0A1W2PP11 408 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 HMX2A2RU54 273 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 RBMY1BA6NDE4 496 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 RBMY1EA6NEQ0 496 aaKnown RBP5.38□□□□□ -1.55
DMD-228ENST00000541735 RBFOX3A6NFN3 312 aa5.38□□□□□ -1.55
DMD-228ENST00000541735 RBMY1DP0C7P1 496 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms