RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FHL3Q13643 280 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 PRSS8Q16651 343 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 VMA21Q3ZAQ7 101 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 RNASE12Q5GAN4 147 aaKnown RBP11.69□□□□□ -0.54
UBE3B-212ENST00000540230 ZNF66Q6ZN08 573 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 TEX45Q8NA69 505 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 OR11H1Q8NG94 326 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 MIXL1Q9H2W2 232 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 AURKAIP1Q9NWT8 199 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-212ENST00000540230 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
UBE3B-212ENST00000540230 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 FAM25AB3EWG3 89 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 FAM25CB3EWG5 89 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 FAM25GB3EWG6 89 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 RAMP3O60896 148 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 HRH1P35367 487 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 DEFA5Q01523 94 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 TNXAQ16473 311 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 C10orf55Q5SWW7 151 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 MZT2AQ6P582 158 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 OR5T1Q8NG75 326 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 OR5M8Q8NGP6 311 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 OR5H2Q8NGV7 314 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 ZNF2Q9BSG1 426 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-212ENST00000540230 FXYD6Q9H0Q3 95 aa11.68□□□□□ -0.54
UBE3B-212ENST00000540230 ZNF430Q9H8G1 570 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-212ENST00000540230 IGHV3-11P01762 117 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 GNRHRP30968 328 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 RUNX1Q01196 453 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 MSMO1Q15800 293 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 DHRS11Q6UWP2 260 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 OR4S2Q8NH73 311 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 AP3S1Q92572 193 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 EXTL2Q9UBQ6 330 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 TGP01266 2768 aa11.67□□□□□ -0.54
UBE3B-212ENST00000540230 SULT1C2O00338 296 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 CTDSP2O14595 271 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 TPPP2P59282 170 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 TAS2R46P59540 309 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 HERV-K104P61576 105 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 LAX1Q8IWV1 398 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 SRSF12Q8WXF0 261 aaKnown RBP11.66□□□□□ -0.54
UBE3B-212ENST00000540230 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 SCPEP1Q9HB40 452 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 ADAM30Q9UKF2 790 aa11.66□□□□□ -0.54
UBE3B-212ENST00000540230 MSGN1A6NI15 193 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 RBMXL2O75526 392 aaKnown RBP11.65□□□□□ -0.54
UBE3B-212ENST00000540230 DUS4LO95620 317 aaKnown RBP11.65□□□□□ -0.54
UBE3B-212ENST00000540230 RPL5P46777 297 aaKnown RBP11.65□□□□□ -0.54
UBE3B-212ENST00000540230 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 SSX9Q7RTT3 188 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 SPAG16Q8N0X2 631 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 PUSL1Q8N0Z8 303 aaKnown RBP11.65□□□□□ -0.54
UBE3B-212ENST00000540230 POC5Q8NA72 575 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 ZBTB34Q8NCN2 500 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 OR1N2Q8NGR9 330 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 OR51H1Q8NH63 302 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 DYNC2LI1Q8TCX1 351 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 RAB2BQ8WUD1 216 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 ABHD1Q96SE0 405 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 KLK11Q9UBX7 282 aa11.65□□□□□ -0.54
UBE3B-212ENST00000540230 IGHV4OR15-8A0A075B7B6 117 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 A0A087WW49 117 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 E7EUB6 86 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 KBTBD11O94819 623 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 TRGV3P03979 118 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.55
UBE3B-212ENST00000540230 MYOD1P15172 320 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 RCVRNP35243 200 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 TMBIM6P55061 237 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 ZNF616Q08AN1 781 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 OR52I2Q8NH67 350 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 RHOVQ96L33 236 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 PHB2Q99623 299 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 ZNF355PQ9NSJ1 428 aa11.65□□□□□ -0.55
UBE3B-212ENST00000540230 A0A1B0GW64 132 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 H3BMQ9 156 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 M0QYG6 137 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 OR2A4O95047 310 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 RLN1P04808 185 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 SLURP1P55000 103 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 EGFEM1PQ0D2K5 195 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 AADACL3Q5VUY0 350 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 MMD2Q8IY49 270 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 OR6F1Q8NGZ6 308 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 TMEM167AQ8TBQ9 72 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 OR2A7Q96R45 310 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 SLA2Q9H6Q3 261 aa11.64□□□□□ -0.55
UBE3B-212ENST00000540230 DNAH9Q9NYC9 4486 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 RGS5O15539 181 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 PGLYRP1O75594 196 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-212ENST00000540230 S1PR2O95136 353 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 CATR1Q13166 79 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 C19orf35Q6ZS72 473 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 ADAD2Q8NCV1 583 aaKnown RBP11.63□□□□□ -0.55
UBE3B-212ENST00000540230 ISOC1Q96CN7 298 aa11.63□□□□□ -0.55
UBE3B-212ENST00000540230 BCL7BQ9BQE9 202 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms