RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 KLK9Q9UKQ9 250 aa10.66□□□□□ -0.7
CD9-208ENST00000538834 PRELID3BQ9Y3B1 194 aa10.66□□□□□ -0.7
CD9-208ENST00000538834 G3V4G9 280 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 WIPF1O43516 503 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 FCGR3BO75015 233 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 CD74P04233 296 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 SAA1P0DJI8 122 aaPredicted RBP10.65□□□□□ -0.7
CD9-208ENST00000538834 KIR2DS2P43631 304 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 SSBP1Q04837 148 aaKnown RBP10.65□□□□□ -0.7
CD9-208ENST00000538834 TMEM267Q0VDI3 215 aaPredicted RBP10.65□□□□□ -0.7
CD9-208ENST00000538834 FXYD3Q14802 87 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 C8orf86Q6ZUL3 223 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 LFNGQ8NES3 379 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 OR5M8Q8NGP6 311 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 TMEM167AQ8TBQ9 72 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 CLCC1Q96S66 551 aa10.65□□□□□ -0.7
CD9-208ENST00000538834 ZNF2Q9BSG1 426 aaPredicted RBP10.65□□□□□ -0.7
CD9-208ENST00000538834 FAM103A1Q9BTL3 118 aaKnown RBP10.65□□□□□ -0.7
CD9-208ENST00000538834 FOXA2Q9Y261 457 aaPredicted RBP10.65□□□□□ -0.7
CD9-208ENST00000538834 FAM25AB3EWG3 89 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 FAM25CB3EWG5 89 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 FAM25GB3EWG6 89 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 GABARAPH6UMI1 98 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 RAMP3O60896 148 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
CD9-208ENST00000538834 FGF2P09038 288 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 HLA-DMAP28067 261 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 MRPS10P82664 201 aaKnown RBP10.64□□□□□ -0.71
CD9-208ENST00000538834 CBX3Q13185 183 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 PLGLAQ15195 96 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 VMA21Q3ZAQ7 101 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 OR6F1Q8NGZ6 308 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 OR4S2Q8NH73 311 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 RSRP1Q9BUV0 290 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 ZNF430Q9H8G1 570 aaPredicted RBP10.64□□□□□ -0.71
CD9-208ENST00000538834 FAM212BQ9NTI7 297 aaPredicted RBP10.64□□□□□ -0.71
CD9-208ENST00000538834 TAS2R8Q9NYW2 309 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 RABL2AQ9UBK7 228 aaPredicted RBP10.64□□□□□ -0.71
CD9-208ENST00000538834 RABL2BQ9UNT1 228 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 A3GALT2U3KPV4 340 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 TGP01266 2768 aa10.64□□□□□ -0.71
CD9-208ENST00000538834 A0A1B0GW64 132 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 H3BUA1 57 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 CCL24O00175 119 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 ZNF735P0CB33 412 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 PF4V1P10720 104 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 TBPP20226 339 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 FXYD4P59646 89 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 DGCR2P98153 550 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 ZNF585BQ52M93 769 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 ACTBL2Q562R1 376 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 PYHIN1Q6K0P9 492 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 IDO2Q6ZQW0 420 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 TMEM229BQ8NBD8 167 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 SMIM4Q8WVI0 70 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 TCTEX1D2Q8WW35 142 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 BORCS5Q969J3 196 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 RHOVQ96L33 236 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 GNB4Q9HAV0 340 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 PLEKHA2Q9HB19 425 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 BET1LQ9NYM9 111 aa10.63□□□□□ -0.71
CD9-208ENST00000538834 A0A1W2PN81 502 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 CGB1A6NKQ9 187 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 E7EUB6 86 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 TNFSF12O43508 249 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 GSTZ1O43708 216 aaPredicted RBP10.62□□□□□ -0.71
CD9-208ENST00000538834 KBTBD11O94819 623 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 HPRT1P00492 218 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 CD3DP04234 171 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 PTBP1P26599 531 aaKnown RBP eCLIP10.62□□□□□ -0.71
CD9-208ENST00000538834 TNFSF8P32971 234 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 CHRNA7P36544 502 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 HERV-K104P61576 105 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 ECSCRQ19T08 205 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 UNQ5815/PRO19632Q6UWF5 114 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 MMD2Q8IY49 270 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 SPAG16Q8N0X2 631 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 ARRDC1Q8N5I2 433 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 MRGPRFQ96AM1 343 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 RCC1LQ96I51 464 aaKnown RBP10.62□□□□□ -0.71
CD9-208ENST00000538834 TINAGL1Q9GZM7 467 aaPredicted RBP10.62□□□□□ -0.71
CD9-208ENST00000538834 SLA2Q9H6Q3 261 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 VSIG4Q9Y279 399 aa10.62□□□□□ -0.71
CD9-208ENST00000538834 TEX22C9J3V5 150 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 GPR31O00270 319 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 RBMXL2O75526 392 aaKnown RBP10.61□□□□□ -0.71
CD9-208ENST00000538834 OR2A4O95047 310 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 HRASP01112 189 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 F2RP25116 425 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 MAS1LP35410 378 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 TAS2R31P59538 309 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 DEFA6Q01524 100 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 EGFEM1PQ0D2K5 195 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 CATR1Q13166 79 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
CD9-208ENST00000538834 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms