RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PEF1Q9UBV8 284 aaKnown RBP3.14□□□□□ -1.91
MCF2-210ENST00000536274 TANC2Q9HCD6 1990 aa3.14□□□□□ -1.91
MCF2-210ENST00000536274 OR4C46A6NHA9 309 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SLC22A20A6NK97 555 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 C11orf94C9JXX5 98 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 K7EN84 100 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 M0R2Z0 102 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 F2RL2O00254 374 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 S1PR2O95136 353 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 IFNA5P01569 189 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR10J4P0C629 311 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ERGP11308 486 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 P2RY2P41231 377 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 HTD2P86397 168 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 PLCXD2Q0VAA5 305 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF77Q15935 545 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 HNRNPA1L2Q32P51 320 aaKnown RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 ALKBH6Q3KRA9 238 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SPINK9Q5DT21 86 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 LRRC25Q8N386 305 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR10G4Q8NGN3 311 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ARPC1AQ92747 370 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 GNPNAT1Q96EK6 184 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 SCGB3A2Q96PL1 93 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 C20orf78Q9BR46 151 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 APOOQ9BUR5 198 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR10A2Q9H208 303 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 CDC42EP3Q9UKI2 254 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 UBE2J1Q9Y385 318 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 MGAQ8IWI9 3026 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 TRAV38-1A0A0B4J264 116 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 IGKV1-9A0A0C4DH69 117 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 A0A0G2JMM0 328 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 A0A1W2PPB8 328 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 LRP5LA4QPB2 252 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 FAM90A27PA6NNH2 459 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 KIR3DP1A8MWS1 328 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 H0YJW9 148 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 TRAPPC2LH3BP13 241 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ARPC3O15145 178 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SPRY1O43609 319 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 RENP00797 406 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 NRASP01111 189 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 MT-ATP8P03928 68 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ISG15P05161 165 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ADH5P11766 374 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 MSR1P21757 451 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 PSMB3P49720 205 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF138P52744 262 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 HERV-K104P61576 105 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF324BQ6AW86 544 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 ADAMTSL5Q6ZMM2 481 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 Q6ZRM9 215 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 LCNL1Q6ZST4 164 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SSX8Q7RTT4 187 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF695Q8IW36 515 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR5AS1Q8N127 324 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 TEX45Q8NA69 505 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 LRRC75AQ8NAA5 344 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR8B12Q8NGG6 310 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR8B3Q8NGG8 313 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SCGB1C1Q8TD33 95 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 LMX1AQ8TE12 382 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 APOBEC3DQ96AK3 386 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 AP1S3Q96PC3 154 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR4C12Q96R67 309 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 EMC6Q9BV81 110 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 RNASE7Q9H1E1 156 aaKnown RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 UFC1Q9Y3C8 167 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 LHFPL6Q9Y693 200 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SPCS1Q9Y6A9 102 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ATP23Q9Y6H3 246 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 DMDP11532 3685 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SPENQ96T58 3664 aaKnown RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF292O60281 2723 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 MDFIC2A0A1B0GVS7 189 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SCO2A0A1W2PP80 73 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF840PA6NDX5 716 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 H3BMH7 237 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 K7ERJ3 54 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 M0QXV9 152 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 HSPB6O14558 160 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 RHBDL1O75783 438 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 PRB4P10163 310 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 CEBPDP49716 269 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 YPEL3P61236 119 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 RPL8P62917 257 aaKnown RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 PRDX4Q13162 271 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 MYBPHQ13203 477 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 EIF3IQ13347 325 aaKnown RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 RUNX3Q13761 415 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ETDBQ3ZM63 59 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 SPANXN5Q5MJ07 72 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 ZNF776Q68DI1 518 aaPredicted RBP3.13□□□□□ -1.91
MCF2-210ENST00000536274 KLHL24Q6TFL4 600 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 Q6ZPA2 131 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 RAB42Q8N4Z0 105 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 NHLRC2Q8NBF2 726 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR2K2Q8NGT1 345 aa3.13□□□□□ -1.91
MCF2-210ENST00000536274 OR10AG1Q8NH19 301 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms