RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PROCRQ9UNN8 238 aa14.97□□□□□ -0.01
UBXN1-213ENST00000532904 IGHV3-64DA0A0J9YX35 117 aa14.96□□□□□ -0.01
UBXN1-213ENST00000532904 CD99P14209 185 aa14.96□□□□□ -0.01
UBXN1-213ENST00000532904 RPS16P62249 146 aaKnown RBP14.96□□□□□ -0.01
UBXN1-213ENST00000532904 FOXF2Q12947 444 aa14.96□□□□□ -0.01
UBXN1-213ENST00000532904 Q8N7P7 452 aa14.96□□□□□ -0.01
UBXN1-213ENST00000532904 NINJ1Q92982 152 aa14.96□□□□□ -0.01
UBXN1-213ENST00000532904 TMEM18Q96B42 140 aa14.96□□□□□ -0.01
UBXN1-213ENST00000532904 PDE6DO43924 150 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 BTNL3Q6UXE8 466 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 SEM1Q6ZVN7 128 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 FAM169BQ8N8A8 192 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 BEND2Q8NDZ0 799 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 SLC25A40Q8TBP6 338 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 NDUFAF3Q9BU61 184 aa14.96□□□□□ -0.02
UBXN1-213ENST00000532904 ZNF71Q9NQZ8 489 aaPredicted RBP14.96□□□□□ -0.02
UBXN1-213ENST00000532904 TMPRSS2O15393 492 aa14.95□□□□□ -0.02
UBXN1-213ENST00000532904 CCKARP32238 428 aa14.95□□□□□ -0.02
UBXN1-213ENST00000532904 AESQ08117 197 aa14.95□□□□□ -0.02
UBXN1-213ENST00000532904 KRTCAP3Q53RY4 240 aa14.95□□□□□ -0.02
UBXN1-213ENST00000532904 COQ2Q96H96 371 aa14.95□□□□□ -0.02
UBXN1-213ENST00000532904 WDR83OSQ9Y284 106 aa14.95□□□□□ -0.02
UBXN1-213ENST00000532904 C15orf62A8K5M9 175 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 PSG7Q13046 419 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 LINC01551Q86U37 167 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 RAB1CQ92928 201 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 CELSR3Q9NYQ7 3312 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 ZNF705GA8MUZ8 300 aaPredicted RBP14.94□□□□□ -0.02
UBXN1-213ENST00000532904 IGLV1-44P01699 117 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 DEFA4P12838 97 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 NDUFB7P17568 137 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 CHRNA7P36544 502 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 GNB1P62873 340 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 C1orf174Q8IYL3 243 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 BTF3L4Q96K17 158 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 IMMP2LQ96T52 175 aa14.94□□□□□ -0.02
UBXN1-213ENST00000532904 LINC00473A8K010 186 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 WNT9BO14905 357 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 SOX15O60248 233 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 RBMXL2O75526 392 aaKnown RBP14.93□□□□□ -0.02
UBXN1-213ENST00000532904 IL3RAP26951 378 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 CNN1P51911 297 aaKnown RBP14.93□□□□□ -0.02
UBXN1-213ENST00000532904 RPL15P61313 204 aaKnown RBP14.93□□□□□ -0.02
UBXN1-213ENST00000532904 SPINK9Q5DT21 86 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 TMEM144Q7Z5S9 345 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 CXorf67Q86X51 503 aaPredicted RBP14.93□□□□□ -0.02
UBXN1-213ENST00000532904 C11orf53Q8IXP5 236 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 GBGT1Q8N5D6 347 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 PRR7Q8TB68 274 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 MRGPRDQ8TDS7 321 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 MISP3Q96FF7 219 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 HSD17B10Q99714 261 aaKnown RBP14.93□□□□□ -0.02
UBXN1-213ENST00000532904 KCNIP2Q9NS61 270 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 TIMP3P35625 211 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 PRSS8Q16651 343 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 FAM78BQ5VT40 261 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 OR5T1Q8NG75 326 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 TP53TG5Q9Y2B4 290 aa14.93□□□□□ -0.02
UBXN1-213ENST00000532904 PTPRZ1P23471 2315 aaPredicted RBP14.92□□□□□ -0.02
UBXN1-213ENST00000532904 MARCH11A6NNE9 402 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 F6UZH7 168 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 K7EM74 188 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 CD1BP29016 333 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 SSX2Q16385 188 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 C1orf185Q5T7R7 199 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 Q6ZR03 302 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 BHLHA15Q7RTS1 189 aaPredicted RBP14.92□□□□□ -0.02
UBXN1-213ENST00000532904 DMRTC2Q8IXT2 367 aaPredicted RBP14.92□□□□□ -0.02
UBXN1-213ENST00000532904 LURAP1Q96LR2 239 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 QTRT1Q9BXR0 403 aaKnown RBP14.92□□□□□ -0.02
UBXN1-213ENST00000532904 FAM215AQ9Y5M1 114 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 SVILO95425 2214 aa14.92□□□□□ -0.02
UBXN1-213ENST00000532904 CRYAAP02489 173 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 MPV17P39210 176 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 GABRA2P47869 451 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 ATP5G3P48201 142 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 Q3ZCU0 254 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 AARDQ4LEZ3 155 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 ACP7Q6ZNF0 438 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 ZNF826PQ6ZT77 177 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 OPN3Q9H1Y3 402 aaPredicted RBP14.91□□□□□ -0.02
UBXN1-213ENST00000532904 TRAV38-1A0A0B4J264 116 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 FOXL1Q12952 345 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 IQCJQ1A5X6 159 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 GCSAMLQ5JQS6 135 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 MRPL41Q8IXM3 137 aaKnown RBP14.91□□□□□ -0.02
UBXN1-213ENST00000532904 KLF14Q8TD94 323 aaPredicted RBP14.91□□□□□ -0.02
UBXN1-213ENST00000532904 R3HDM4Q96D70 268 aa14.91□□□□□ -0.02
UBXN1-213ENST00000532904 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.9□□□□□ -0.02
UBXN1-213ENST00000532904 ST8SIA5O15466 376 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 NDUFB4O95168 129 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 SNRPCP09234 159 aaKnown RBP14.9□□□□□ -0.02
UBXN1-213ENST00000532904 EGR1P18146 543 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 LINC00205P59089 165 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 UBE2G2P60604 165 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 FOXC1Q12948 553 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 CST9LP1Q5W188 147 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 FAM57AQ8TBR7 257 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 WASF3Q9UPY6 502 aa14.9□□□□□ -0.02
UBXN1-213ENST00000532904 TRAPPC1Q9Y5R8 145 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms