RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 C17orf100A8MU93 164 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 C17orf98A8MV24 154 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 H3BP45 60 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 M0R1X1 148 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 DNASE2O00115 360 aaPredicted RBP9.71□□□□□ -0.86
USF1-208ENST00000528768 SOX15O60248 233 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 S1PR2O95136 353 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 OR4A8P0C604 315 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
USF1-208ENST00000528768 G6PCP35575 357 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 THBS3P49746 956 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 PPT1P50897 306 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 RPL30P62888 115 aaKnown RBP9.71□□□□□ -0.86
USF1-208ENST00000528768 SLC38A11Q08AI6 406 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 LTC4SQ16873 150 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 OR2B11Q5JQS5 317 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 TEX36Q5VZQ5 186 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 BTNL3Q6UXE8 466 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 THNSL2Q86YJ6 484 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 PUSL1Q8N0Z8 303 aaKnown RBP9.71□□□□□ -0.86
USF1-208ENST00000528768 OR10A7Q8NGE5 316 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 CORO2AQ92828 525 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 R3HDM4Q96D70 268 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 AIFM2Q9BRQ8 373 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 SLC35B3Q9H1N7 401 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 GFOD1Q9NXC2 390 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 KIAA1456Q9P272 454 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 CLN8Q9UBY8 286 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 TIMM9Q9Y5J7 89 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 ANK2Q01484 3957 aa9.71□□□□□ -0.86
USF1-208ENST00000528768 DPRXA6NFQ7 191 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 DEFB108AA8MXU0 73 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 SIGLEC5O15389 551 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 IFNA1P01562 189 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 MBP02144 154 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 TFF1P04155 84 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 METTL15P1P0C7V9 234 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 P0C879 139 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 DUTP33316 252 aaKnown RBP9.7□□□□□ -0.86
USF1-208ENST00000528768 SRSF3P84103 164 aaKnown RBP9.7□□□□□ -0.86
USF1-208ENST00000528768 MEF2CQ06413 473 aaPredicted RBP9.7□□□□□ -0.86
USF1-208ENST00000528768 GUCA2BQ16661 112 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 LRRC75BQ2VPJ9 315 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 DHRS7BQ6IAN0 325 aaPredicted RBP9.7□□□□□ -0.86
USF1-208ENST00000528768 ATRAIDQ6UW56 229 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 TMEM14EPQ6UXP3 125 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 ZNF788Q6ZQV5 615 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 ZNF525Q8N782 197 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 OR10P1Q8NGE3 313 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 OR4A16Q8NH70 328 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 OR4S2Q8NH73 311 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 DTD1Q8TEA8 209 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 AGMATQ9BSE5 352 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 ABHD14AQ9BUJ0 271 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 TMEM147Q9BVK8 224 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 HIPK2Q9H2X6 1198 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 GAL3ST2Q9H3Q3 398 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 IDI2-AS1Q9NZ38 188 aa9.7□□□□□ -0.86
USF1-208ENST00000528768 TRAV1-1A0A0B4J248 108 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 RBFOX3A6NFN3 312 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 C17orf112F2Z3M2 114 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 RAMP3O60896 148 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 FCGR3BO75015 233 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 CYB5R3P00387 301 aaPredicted RBP9.69□□□□□ -0.86
USF1-208ENST00000528768 NQO2P16083 231 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 ADCYAP1P18509 176 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 CCKARP32238 428 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 BSPH1Q075Z2 132 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 KRTAP1-1Q07627 177 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 ADIPOQQ15848 244 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 IZUMO4Q1ZYL8 232 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 PRAMEF5Q5TYX0 476 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 ODF3L1Q8IXM7 274 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 ZNF709Q8N972 641 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 OR52E5Q8NH55 327 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 GAFA1Q96PS6 74 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 DCTN5Q9BTE1 182 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 MS4A5Q9H3V2 200 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 HEATR1Q9H583 2144 aaKnown RBP9.69□□□□□ -0.86
USF1-208ENST00000528768 UBTD1Q9HAC8 227 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 DYNLRB1Q9NP97 96 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 FBXO7Q9Y3I1 522 aa9.69□□□□□ -0.86
USF1-208ENST00000528768 PPIAL4EA0A075B759 164 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 PPIAL4DF5H284 164 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 H7C2Y5 167 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 PPIHO43447 177 aaKnown RBP9.68□□□□□ -0.86
USF1-208ENST00000528768 CD5LO43866 347 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 HRASP01112 189 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 IFNA17P01571 189 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 CD3EP07766 207 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 PPIAL4FP0DN26 164 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 CGB3P0DN86 165 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 CGB7P0DN87 165 aa9.68□□□□□ -0.86
USF1-208ENST00000528768 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
USF1-208ENST00000528768 LOXL3P58215 753 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms