RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 DEGS1O15121 323 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CA11O75493 328 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 NDUFB6O95139 128 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CLDN14O95500 239 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 OR2H2O95918 312 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 HAND1O96004 215 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CYB5R3P00387 301 aaPredicted RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 IFNA21P01568 189 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 IFNA5P01569 189 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CD74P04233 296 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 FCGR3AP08637 254 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 ZP3P21754 424 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 FAUP35544 74 aaKnown RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 CDKN1AP38936 164 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CEACAM3P40198 252 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 PPT1P50897 306 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 ATP5J2P56134 94 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 ERVK11-1P61568 191 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 BTG1P62324 171 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CCL8P80075 99 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 PAX5Q02548 391 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 HNF4GQ14541 408 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 MEF2DQ14814 521 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 ATXN7L3Q14CW9 347 aaPredicted RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 RBMS2Q15434 407 aaKnown RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 MPV17LQ2QL34 196 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 SMIM21Q3B7S5 101 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 BSXQ3C1V8 233 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 RNASE10Q5GAN6 216 aaKnown RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 NHLRC3Q5JS37 347 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 AGAP6Q5VW22 663 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 SSX8Q7RTT4 187 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 Q8IYB0 196 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 MTURNQ8N3F0 131 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 STXBP6Q8NFX7 210 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 OR13C8Q8NGS7 320 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 OR5H2Q8NGV7 314 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 OR4K15Q8NH41 348 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 OR10J5Q8NHC4 309 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 UBALD1Q8TB05 177 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 PLPPR1Q8TBJ4 325 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CCDC107Q8WV48 283 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 MARC2Q969Z3 335 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CREB3L1Q96BA8 519 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 NEURL2Q9BR09 285 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 MARVELD1Q9BSK0 173 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 CHST6Q9GZX3 395 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 ZNF286AQ9HBT8 521 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 HES4Q9HCC6 221 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 DYNLRB1Q9NP97 96 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 RCC2Q9P258 522 aaKnown RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 COPZ2Q9P299 210 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 ZNF107Q9UII5 783 aaPredicted RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 MGAT4AQ9UM21 535 aa3.44□□□□□ -1.86
CD44-226ENST00000527889 KMT2CQ8NEZ4 4911 aaKnown RBP3.44□□□□□ -1.86
CD44-226ENST00000527889 CUBNO60494 3623 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 IGKV1D-17A0A075B6S4 117 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 A0A0U1RRA0 63 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 A0A1B0GW55 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 A0A1W2PPR1 153 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 A6NNC1 897 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 MCRIP1C9JLW8 97 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 J3QR06 171 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 SH2D1BO14796 132 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 SNAI2O43623 268 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 NAPSAO96009 420 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 S100A8P05109 93 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 FBP1P09467 338 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L2P0CJ85 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L3P0CJ86 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L4P0CJ87 422 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L5P0CJ88 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L6P0CJ89 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L7P0CJ90 424 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 PSG2P11465 335 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 TBPP20226 339 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 GABRA2P47869 451 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 OR3A1P47881 315 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 OR3A3P47888 321 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 TAS2R46P59540 309 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 UBE2MP61081 183 aaKnown RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 SNRPEP62304 92 aaKnown RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 COL10A1Q03692 680 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 BAMBIQ13145 260 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 ZNF146Q15072 292 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 CDK10Q15131 360 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 TMEM249Q2WGJ8 235 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 ZNF672Q499Z4 452 aaPredicted RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 SUMO4Q6EEV6 95 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DUX4L9Q6RFH8 374 aaPredicted RBP3.43□□□□□ -1.86
CD44-226ENST00000527889 TMED4Q7Z7H5 227 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 LINC00596Q86U02 117 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 C1orf87Q8N0U7 546 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 MUC15Q8N387 334 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 GCSAMQ8N6F7 178 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
CD44-226ENST00000527889 DEFB108BQ8NET1 73 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms