RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CNTFRP26992 372 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 G6PCP35575 357 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ACVRL1P37023 503 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 POLR2HP52434 150 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 HMGA2P52926 109 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 MP68P56378 58 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 DEFA1P59665 94 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 HTR4Q13639 388 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 RBMY1FQ15415 496 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 COA6Q5JTJ3 125 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 STPG1Q5TH74 334 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ACP7Q6ZNF0 438 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 TCF23Q7RTU1 214 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 FAM19A3Q7Z5A8 133 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 PRNTQ86SH4 94 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 SGPP2Q8IWX5 399 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 TMEM61Q8N0U2 210 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 KLK6Q92876 244 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 NARS2Q96I59 477 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 KCNS1Q96KK3 526 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 OR2M2Q96R28 347 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ZNF649Q9BS31 505 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 POLR2J2Q9GZM3 115 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 POLR2J3Q9H1A7 115 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 VCXQ9H320 206 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 GPR84Q9NQS5 396 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ZNF331Q9NQX6 463 aaPredicted RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 FAM49BQ9NUQ9 324 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 SLC23A2Q9UGH3 650 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 LINC00527Q9UJ94 153 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 FIS1Q9Y3D6 152 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 MRC1P22897 1456 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 KMT2EQ8IZD2 1858 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 DLG5Q8TDM6 1919 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ZSWIM8A7E2V4 1837 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ARHGEF17Q96PE2 2063 aaPredicted RBP3.37□□□□□ -1.87
CD44-213ENST00000525209 hCG_1818297A0A087WSY0 165 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 A0A087WUU8 490 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 TRAV8-1A0A0A6YYK1 113 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 CIB4A0PJX0 185 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 OR4C45A6NMZ5 311 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 CD300LBA8K4G0 201 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 A8MT66 165 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 TP53I11O14683 189 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 RAMP2O60895 175 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 GYPCP04921 128 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 CHTF8P0CG12 524 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 IL1RNP18510 177 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 COX7A1P24310 79 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 NPY1RP25929 384 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ZNF140P52738 457 aaPredicted RBP3.37□□□□□ -1.87
CD44-213ENST00000525209 RAP1AP62834 184 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 PSG9Q00887 426 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 SRSF4Q08170 494 aaKnown RBP3.37□□□□□ -1.87
CD44-213ENST00000525209 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 PLCXD2Q0VAA5 305 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ADIGQ0VDE8 80 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 GUCA2BQ16661 112 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ABCA11PQ4W5N1 156 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 NXNL2Q5VZ03 156 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 IGFL4Q6B9Z1 124 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 FAM53AQ6NSI3 398 aaPredicted RBP3.37□□□□□ -1.87
CD44-213ENST00000525209 DNAJC24Q6P3W2 148 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ARL9Q6T311 187 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 SHISA6Q6ZSJ9 500 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 Q6ZSR6 202 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ZNF627Q7L945 461 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 TMEM86AQ8N2M4 240 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 TMEM75Q8N9X5 138 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 OR4C6Q8NH72 309 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 NPRL2Q8WTW4 380 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 DDB2Q92466 427 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 DCUN1D4Q92564 292 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 FRZBQ92765 325 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ZNF524Q96C55 264 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 IP6K3Q96PC2 410 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 PDFQ9HBH1 243 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 POPDC3Q9HBV1 291 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 MED11Q9P086 117 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ANAPC10Q9UM13 185 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 SCN9AQ15858 1988 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 LAMB4A4D0S4 1761 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 ANKRD36CQ5JPF3 1778 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 NFASCO94856 1347 aa3.37□□□□□ -1.87
CD44-213ENST00000525209 RIC1Q4ADV7 1423 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 SIPA1L3O60292 1781 aaPredicted RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 PEX7O00628 323 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 ZNF354AO60765 605 aaPredicted RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 PPP1R3DO95685 299 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 TOMM40O96008 361 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 FABP3P05413 133 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 OR4Q2P0C623 313 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 CTSEP14091 401 aa3.36□□□□□ -1.87
CD44-213ENST00000525209 RPS4Y1P22090 263 aaKnown RBP3.36□□□□□ -1.87
CD44-213ENST00000525209 KDELR1P24390 212 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms