RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 OR4A16Q8NH70 328 aa4.51□□□□□ -1.69
CLINT1-208ENST00000524306 RAB24Q969Q5 203 aa4.51□□□□□ -1.69
CLINT1-208ENST00000524306 S1PR3Q99500 378 aa4.51□□□□□ -1.69
CLINT1-208ENST00000524306 QTRT1Q9BXR0 403 aaKnown RBP4.51□□□□□ -1.69
CLINT1-208ENST00000524306 MIOXQ9UGB7 285 aa4.51□□□□□ -1.69
CLINT1-208ENST00000524306 MED12LQ86YW9 2145 aa4.51□□□□□ -1.69
CLINT1-208ENST00000524306 CHD3Q12873 2000 aaKnown RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 MED19A0JLT2 244 aaPredicted RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 ZFP92A6NM28 416 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 ST8SIA5O15466 376 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 CLN5O75503 358 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HRASP01112 189 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 OR9G9P0C7N8 305 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 STAG3L2P0CL84 134 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 TNFSF4P23510 183 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 RPL29P47914 159 aaKnown RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 PDLIM4P50479 330 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 RPL23P62829 140 aaKnown RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 MSMPQ1L6U9 139 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 BSXQ3C1V8 233 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 OR8G2PQ6IF36 304 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 ZNF788Q6ZQV5 615 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 ZNF808Q8N4W9 903 aaPredicted RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 OR51G1Q8NGK1 321 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 OR4A5Q8NH83 315 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 RNASEH2CQ8TDP1 164 aaKnown RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 TMEM190Q8WZ59 177 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 C11orf52Q96A22 123 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 ACY3Q96HD9 319 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 OR2V2Q96R30 315 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 MSL2Q9HCI7 577 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 FKBP11Q9NYL4 201 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 JKAMPQ9P055 326 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 SLC25A10Q9UBX3 287 aaPredicted RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 PITPNC1Q9UKF7 332 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 PRNDQ9UKY0 176 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 TRGV10A0A0A0MS01 117 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 SPAARA0A1B0GVQ0 90 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 A8MXE2 369 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 CXorf1O96002 111 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 IFNA10P01566 189 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 FAM3BP58499 235 aaPredicted RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 HSPE1P61604 102 aaKnown RBP4.5□□□□□ -1.69
CLINT1-208ENST00000524306 DEFB109BQ30KR1 87 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 AKIRIN2Q53H80 203 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 SLC16A13Q7RTY0 426 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 SMIM7Q9BQ49 75 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 NPVFQ9HCQ7 196 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 BET1LQ9NYM9 111 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 GNG12Q9UBI6 72 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 MSRB2Q9Y3D2 182 aa4.5□□□□□ -1.69
CLINT1-208ENST00000524306 TGIF2-C20orf24A0A0A6YYL0 155 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 M0R1X1 148 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 C1QTNF9P0C862 333 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 TFF3Q07654 80 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 FOXL1Q12952 345 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 RTL8BQ17RB0 113 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 ZNF674Q2M3X9 581 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 LBHQ53QV2 105 aaPredicted RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 PRAMEF5Q5TYX0 476 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 TREML4Q6UXN2 200 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 SLC25A48Q6ZT89 311 aaKnown RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 CISD2Q8N5K1 135 aaKnown RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 LINC00311Q8N616 119 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 NEUROG1Q92886 237 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 SLC35E1Q96K37 410 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 GAFA1Q96PS6 74 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 COL25A1Q9BXS0 654 aaPredicted RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 PARLQ9H300 379 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 TMEM140Q9NV12 185 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 GAR1Q9NY12 217 aaKnown RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 DUSP13Q9UII6 198 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 RPUSD1Q9UJJ7 312 aaKnown RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 TCF19Q9Y242 345 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 LINC00312Q9Y6C7 94 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 DOCK7Q96N67 2140 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 LAMA1P25391 3075 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 A0A1B0GV50 99 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 FCGR3BO75015 233 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 YIF1AO95070 293 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 IGHV1-46P01743 117 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 ZNF134P52741 427 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 ZNF137PP52743 207 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 ELLP55199 621 aaPredicted RBP4.49□□□□□ -1.69
CLINT1-208ENST00000524306 BPIFB3P59826 476 aa4.49□□□□□ -1.69
CLINT1-208ENST00000524306 RAB4BP61018 213 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms