RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SLC29A1Q99808 456 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 SPIN2AQ99865 258 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 SPIN2BQ9BPZ2 258 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 MFFQ9GZY8 342 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 FGF20Q9NP95 211 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-211ENST00000523441 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 DNAH11Q96DT5 4516 aa8.58□□□□□ -1.04
SDCBP-211ENST00000523441 IGHV3OR16-8A0A075B7F1 116 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 SAA1P0DJI8 122 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-211ENST00000523441 GPR183P32249 361 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 TFPI2P48307 235 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 UBE2KP61086 200 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 UNC119Q13432 240 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 INSL4Q14641 139 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 OR4A47Q6IF82 309 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 ZNF575Q86XF7 245 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 TTC9CQ8N5M4 171 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 NKAIN3Q8N8D7 197 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 TEX45Q8NA69 505 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 OR11H2Q8NH07 326 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 CD300LFQ8TDQ1 290 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 PTX4Q96A99 478 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 EEF1AKMT3Q96AZ1 226 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 PGLYRP3Q96LB9 341 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 CMSS1Q9BQ75 279 aaKnown RBP8.57□□□□□ -1.04
SDCBP-211ENST00000523441 Q9N2K0 584 aa8.57□□□□□ -1.04
SDCBP-211ENST00000523441 IGKV3-7A0A075B6H7 116 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 MFSD2BA6NFX1 497 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 ZNF207O43670 478 aaKnown RBP8.56□□□□□ -1.04
SDCBP-211ENST00000523441 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-211ENST00000523441 MFAP2P55001 183 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 P2RY14Q15391 338 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 IGSF11Q5DX21 431 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 FAM209BQ5JX69 171 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 RBM48Q5RL73 367 aaKnown RBP8.56□□□□□ -1.04
SDCBP-211ENST00000523441 CDH26Q8IXH8 852 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 MAFIPQ8WZ33 124 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 UQCC2Q9BRT2 126 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 GHRLQ9UBU3 117 aa8.56□□□□□ -1.04
SDCBP-211ENST00000523441 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 KIR2DL5BA0A0G2JN68 375 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 KIR2DL5BA0A0G2JPC4 375 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 LOC100130705A0A1B0GUX0 176 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 LINC00473A8K010 186 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 A8MWP6 167 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 TRDCB7Z8K6 153 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 FCGR3BO75015 233 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 CLEC3BP05452 202 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 UBBP0CG47 229 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 DEFA4P12838 97 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 MYOD1P15172 320 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 AREGP15514 252 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 CELP19835 753 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 DCKP27707 260 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 MAP2K4P45985 399 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 SLC25A42Q86VD7 318 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 KIR2DL5AQ8N109 375 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 GVQW1Q8N7I0 195 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-211ENST00000523441 OR4A5Q8NH83 315 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 KIR2DL5BQ8NHK3 375 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 GALNT14Q96FL9 552 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 ARHGAP5-AS1Q96IT6 56 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 RIMS4Q9H426 269 aaPredicted RBP8.55□□□□□ -1.04
SDCBP-211ENST00000523441 C12orf4Q9NQ89 552 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 MRPS18AQ9NVS2 196 aaKnown RBP8.55□□□□□ -1.04
SDCBP-211ENST00000523441 ZNF257Q9Y2Q1 563 aa8.55□□□□□ -1.04
SDCBP-211ENST00000523441 MPTX1A8MV57 137 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 E7EUB6 86 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 GSTT2P0CG29 244 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 GSTT2BP0CG30 244 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 RRASP10301 218 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 CRHBPP24387 322 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
SDCBP-211ENST00000523441 CDK10Q15131 360 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 GLT8D1Q68CQ7 371 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 PLET1Q6UQ28 207 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 MMD2Q8IY49 270 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 OR10J5Q8NHC4 309 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 SPAG8Q99932 426 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-211ENST00000523441 GINS4Q9BRT9 223 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 C20orf24Q9BUV8 137 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 TM2D1Q9BX74 207 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 CSTL1Q9H114 145 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 LPAR5Q9H1C0 372 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 MRPL27Q9P0M9 148 aaKnown RBP8.54□□□□□ -1.04
SDCBP-211ENST00000523441 MGAT4AQ9UM21 535 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 UFC1Q9Y3C8 167 aa8.54□□□□□ -1.04
SDCBP-211ENST00000523441 A0A075B6Q4 140 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 TEX22C9J3V5 150 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 RTL8CO15255 209 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 FABP7O15540 132 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 CREBL2O60519 120 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-211ENST00000523441 WBP4O75554 376 aaKnown RBP8.53□□□□□ -1.04
SDCBP-211ENST00000523441 CIB2O75838 187 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 IL6RP08887 468 aaPredicted RBP8.53□□□□□ -1.04
SDCBP-211ENST00000523441 SRMP19623 302 aa8.53□□□□□ -1.04
SDCBP-211ENST00000523441 DUTP33316 252 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms