RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 FAM216AQ8WUB2 273 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 TAF15Q92804 592 aaKnown RBP eCLIP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 TLNRD1Q9H1K6 362 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 TUBD1Q9UJT1 453 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 PXMP4Q9Y6I8 212 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 PTBP3O95758 552 aaKnown RBP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 ZNF735P0CB33 412 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 UCP1P25874 307 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 TBR1Q16650 682 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 PEAR1Q5VY43 1037 aaPredicted RBP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 H1FOOQ8IZA3 346 aaPredicted RBP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 PNKDQ8N490 385 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 FAM122AQ96E09 287 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 NRIP2Q9BQI9 281 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 SEC11CQ9BY50 192 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 RALYQ9UKM9 306 aaKnown RBP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 C17orf98A8MV24 154 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 HTR1DP28221 377 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 FHITP49789 147 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 ATP5J2P56134 94 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 SCGB2A2Q13296 93 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 RTN4RL2Q86UN3 420 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 RSRP1Q9BUV0 290 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 A8MXK9 166 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 F8VVB4 439 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 F8VWA3 439 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGHV3-48P01763 117 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 FAM157CP0CG43 387 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 CHRDL1Q9BU40 450 aa11.02□□□□□ -0.64
PCDHGB1-201ENST00000523390 TGOLN2O43493 480 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 COX6B1P14854 86 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 MIC13Q5XKP0 118 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 DHRS11Q6UWP2 260 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 MMD2Q8IY49 270 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 MIOXQ9UGB7 285 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 PLAUP00749 431 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 HGFACQ04756 655 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 C10orf113Q5VZT2 155 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 FAM166AQ6J272 317 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 PLSCR4Q9NRQ2 329 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 CLCF1Q9UBD9 225 aa11.02□□□□□ -0.65
PCDHGB1-201ENST00000523390 XKRY2A2RUG3 117 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 FAM90A26D6RGX4 464 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 H3BQ15 152 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 GOSR1O95249 250 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 RNF2Q99496 336 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 NAT8Q9UHE5 227 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 MED13Q9UHV7 2174 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 CEACAM18A8MTB9 384 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LILRA1O75019 489 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 KBTBD11O94819 623 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 DLK1P80370 383 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LDLRAD3Q86YD5 345 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 CYB561D1Q8N8Q1 229 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LOC105371242A0A075B767 164 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 A1L4Q6 167 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LYNX1G3V0Z9 82 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LDLRAD4O15165 306 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LYNX1P0DP58 116 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 CCL3L1P16619 93 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 TCL1AP56279 114 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 CLEC7AQ9BXN2 247 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 C20orf202A1L168 122 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 REG1AP05451 166 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 LIPFP07098 398 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 PRB3Q04118 309 aaPredicted RBP11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 Q8WTZ3 238 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
PCDHGB1-201ENST00000523390 IGSF23A1L1A6 192 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 GATCO43716 136 aaKnown RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 OTX1P32242 354 aaPredicted RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 Q6ZS92 163 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 FAM103A1Q9BTL3 118 aaKnown RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 ETV2O00321 342 aaPredicted RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 TIMP3P35625 211 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 RND2P52198 227 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 SUMO1P63165 101 aaKnown RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 PNRC1Q12796 327 aaPredicted RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 RNASE6Q93091 150 aaKnown RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
PCDHGB1-201ENST00000523390 NCOR2Q9Y618 2525 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 TRBV6-7A0A0A0MS04 114 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 LINC00869P0C866 280 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 BCL2P10415 239 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 SSX7Q7RTT5 188 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 OR4C13Q8NGP0 309 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
PCDHGB1-201ENST00000523390 TRAV14DV4A0A0A6YYC5 116 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 ZNF880Q6PDB4 577 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 TRAPPC1Q9Y5R8 145 aa10.99□□□□□ -0.65
PCDHGB1-201ENST00000523390 IGHV3OR16-10A0A075B7F0 116 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms