RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OR51T1Q8NGJ9 327 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 GPX8Q8TED1 209 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ARPC1AQ92747 370 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 BORCS8Q96FH0 119 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 HSPB9Q9BQS6 159 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 URM1Q9BTM9 101 aaKnown RBP5.03□□□□□ -1.6
SDCBP-210ENST00000522843 CST11Q9H112 138 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 METTL9Q9H1A3 318 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 AUNIPQ9H7T9 357 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 GPR173Q9NS66 373 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 TAS2R8Q9NYW2 309 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 MTFP1Q9UDX5 166 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 TBC1D24Q9ULP9 559 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 HSF4Q9ULV5 492 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 ANAPC10Q9UM13 185 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 MRPS28Q9Y2Q9 187 aaKnown RBP5.03□□□□□ -1.6
SDCBP-210ENST00000522843 LINC00312Q9Y6C7 94 aa5.03□□□□□ -1.6
SDCBP-210ENST00000522843 hADV38S2A0JD32 116 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 NAP1L6A6NFF2 107 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 C12orf77C9JDV5 145 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 J3QT63 122 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 NXPH2O95156 264 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 GSTT2BP0CG30 244 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 GTF2F2P13984 249 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 PRSS3P35030 304 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 HAAOP46952 286 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 TAS2R20P59543 309 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 IL24Q13007 206 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 PLA2G7Q13093 441 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 TMEM69Q5SWH9 247 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 PXDC1Q5TGL8 231 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 RTN4RL2Q86UN3 420 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 CENPSQ8N2Z9 138 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 Q8N6K4 173 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 Q8N9W7 124 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 TMEM104Q8NE00 496 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 OR56B1Q8NGI3 324 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 OR10R2Q8NGX6 335 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 ZNF596Q8TC21 504 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 TNFAIP8L1Q8WVP5 186 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 FCAMRQ8WWV6 532 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 FAM46BQ96A09 425 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 RFT1Q96AA3 541 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 UBE2E2Q96LR5 201 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 CHST6Q9GZX3 395 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 PLSCR3Q9NRY6 295 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 RBFOX1Q9NWB1 397 aaKnown RBP5.02□□□□□ -1.61
SDCBP-210ENST00000522843 IL36RNQ9UBH0 155 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 MGAT4CQ9UBM8 478 aa5.02□□□□□ -1.61
SDCBP-210ENST00000522843 TRAV18A0A075B6X5 111 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 A0A0A6YYD4 124 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 IGKV1-12A0A0C4DH73 117 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 ANKRD20A5PA0PJZ0 165 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 OOSP1A8MZH6 123 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 HSPA12AO43301 675 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 LANCL1O43813 399 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 RBBP9O75884 186 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 IGKV1D-33P01593 117 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 IGKV1-33P01594 117 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 IGKV1D-12P01611 117 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 IGLV1-51P01701 117 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 CD74P04233 296 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 MGMTP16455 207 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 RFX2P48378 723 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 ARHGDIBP52566 201 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 AP3S2P59780 193 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 EBI3Q14213 229 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 HES1Q14469 280 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 CDNFQ49AH0 187 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 PLCXD3Q63HM9 321 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 OR10K2Q6IF99 312 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 HEPN1Q6WQI6 88 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 LINC00596Q86U02 117 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 Q8IYB0 196 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 POC5Q8NA72 575 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 TMEM229BQ8NBD8 167 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 OR52I2Q8NH67 350 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 SPACA5Q96QH8 159 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 GPER1Q99527 375 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 S100A13Q99584 98 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 TMEM59Q9BXS4 323 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 ATG5Q9H1Y0 275 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 MTCH1Q9NZJ7 389 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 COPZ2Q9P299 210 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 ING4Q9UNL4 249 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 MRPS7Q9Y2R9 242 aaKnown RBP5.01□□□□□ -1.61
SDCBP-210ENST00000522843 KCNK7Q9Y2U2 307 aa5.01□□□□□ -1.61
SDCBP-210ENST00000522843 IGKV2D-30A0A075B6S6 120 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 IGHV4OR15-8A0A075B7B6 117 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 A0A087WW49 117 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 FAM230AA0A1W2PPH8 454 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 CENPXA8MT69 81 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 MFNGO00587 321 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 LYRM1O43325 122 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 OCMP0CE72 109 aaPredicted RBP5□□□□□ -1.61
SDCBP-210ENST00000522843 HIST1H1DP16402 221 aaKnown RBP5□□□□□ -1.61
SDCBP-210ENST00000522843 TBPP20226 339 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 FUT3P21217 361 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 CEACAM3P40198 252 aa5□□□□□ -1.61
SDCBP-210ENST00000522843 CBX5P45973 191 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms