RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 MED31Q9Y3C7 131 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM56-RWDD3S4R434 201 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 V9GY05 133 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SPACA6W5XKT8 324 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TDRD6O60522 2096 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 FREM3P0C091 2139 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 MUC22E2RYF6 1773 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 DOCK11Q5JSL3 2073 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ATG2BQ96BY7 2078 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRAV8-7A0A075B6U6 113 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A087WZY1 265 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRAV1-1A0A0B4J248 108 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGHV2OR16-5A0A0B4J2B6 119 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A0G2JN53 185 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A0J9YY10 115 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A1B0GWA3 101 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF860A6NHJ4 632 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 B4DEV8 164 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 FTCDNL1E5RQL4 147 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PPP5D1E7EU14 171 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 H0YGG7 62 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 H3BQ15 152 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 J3QLW9 94 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 K7ENP7 123 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 TCF21O43680 179 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 DNAJB6O75190 326 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPP14O95059 124 aaKnown RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGHV3-23P01764 117 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 TYMSP04818 313 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CA3P07451 260 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CT62P0C5K7 136 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ASAH2BP0C7U1 165 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PGA4P0DJD7 388 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PGA5P0DJD9 388 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ESDP10768 282 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PNMTP11086 282 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CXCR1P25024 350 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CD34P28906 385 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PYCR1P32322 319 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 GABRA3P34903 492 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRSS3P35030 304 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 NAA10P41227 235 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CAPZBP47756 277 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARRB1P49407 418 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 NOVA1P51513 510 aaKnown RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 RAB38P57729 211 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARF6P62330 175 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPL8P62917 257 aaKnown RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CCL20P78556 96 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 QRFPP83859 136 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAM53BQ14153 422 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ATXN7L3Q14CW9 347 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ELOCQ15369 112 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 AKR1C8PQ5T2L2 129 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRPL2Q5T653 305 aaKnown RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 LINC01590Q5TEZ4 76 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PVRIGQ6DKI7 326 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM205Q6UW68 189 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OLIG3Q7RTU3 272 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 GRINAQ7Z429 371 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ANKRD37Q7Z713 158 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF429Q86V71 674 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 LHFPL1Q86WI0 220 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 TGIF2LYQ8IUE0 185 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 C20orf196Q8IYI0 205 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 CA13Q8N1Q1 262 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF615Q8N8J6 731 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 LFNGQ8NES3 379 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR10H4Q8NGA5 316 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR9K2Q8NGE7 335 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR2D3Q8NGH3 330 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR51F2Q8NH61 342 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF563Q8TA94 476 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ING5Q8WYH8 240 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR1E3Q8WZA6 343 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 THRSPQ92748 146 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 KLK6Q92876 244 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PTX4Q96A99 478 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 FGGYQ96C11 551 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 DDIT4LQ96D03 193 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 SDSLQ96GA7 329 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 JSRP1Q96MG2 331 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR2M4Q96R27 311 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 IMMP2LQ96T52 175 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRRT1Q99946 306 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PDCD1LG2Q9BQ51 273 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 C20orf24Q9BUV8 137 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 PLA2G2FQ9BZM2 168 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 RGCCQ9H4X1 137 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 UBE2ZQ9H832 354 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 WFDC1Q9HC57 220 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 RAB18Q9NP72 206 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 ADAP2Q9NPF8 381 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 FUT9Q9Y231 359 aa2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 FARSAQ9Y285 508 aaKnown RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRPS33Q9Y291 106 aaKnown RBP2.31□□□□□ -2.04
HMGB1P41-201ENST00000520234 UTRNP46939 3433 aa2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 NCOA6Q14686 2063 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P41-201ENST00000520234 MED12LQ86YW9 2145 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms