RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C15orf65H3BRN8 121 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 J3KT08 172 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 SH2D1BO14796 132 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 SYNGR3O43761 229 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 UPK3AO75631 287 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 NUDT14O95848 222 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 MOSP00540 346 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGLV3-25P01717 112 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 ORM1P02763 201 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 CD55P08174 381 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 CELA2AP08217 269 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM106CPP0CH98 169 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 IFITM1P13164 125 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGFBP3P17936 291 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 SRD5A1P18405 259 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 ALOX5APP20292 161 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 VDAC1P21796 283 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 ACP1P24666 158 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 GPR1P46091 355 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 FOXG1P55316 489 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR1D5P58170 312 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 PFN3P60673 137 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 NTHL1P78549 312 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 PSG7Q13046 419 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 GAGE2BQ13066 116 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 ARFRP1Q13795 201 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGFBP7Q16270 282 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 ITPRIPL2Q3MIP1 535 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM106AQ4KMX7 169 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 GAGE2EQ4V326 116 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 C19orf54Q5BKX5 351 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM215Q68D42 235 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TPRG1Q6ZUI0 275 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM252Q8N6L7 170 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TPRX1Q8N7U7 411 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR5C1Q8NGR4 320 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR9G1Q8NH87 305 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM54Q969K7 222 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 CHCHD1Q96BP2 118 aaKnown RBP4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 ADAT3Q96EY9 351 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 C18orf12Q96KH6 178 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR4C12Q96R67 309 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 MAP1LC3CQ9BXW4 147 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 R3HDMLQ9H3Y0 253 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 NAA60Q9H7X0 242 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 SAP30LQ9HAJ7 183 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 GNB4Q9HAV0 340 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 SCRT2Q9NQ03 307 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 KCNIP2Q9NS61 270 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 TAAR2Q9P1P5 351 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 GAGE2DQ9UEU5 116 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 RCL1Q9Y2P8 373 aaKnown RBP4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 POLDIP2Q9Y2S7 368 aa4.04□□□□□ -1.76
HMGB1P19-201ENST00000517578 MYO16Q9Y6X6 1858 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGLV3-10A0A075B6K4 115 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TRAV36DV7A0A075B6V5 113 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TRGV10A0A0A0MS01 117 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SNURFLB1AK76 121 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 C21orf140B9A014 251 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 H3BMG7 143 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 RHODO00212 210 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC31A1O15431 190 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC16A7O60669 478 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TBL1XO60907 577 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 LDB3O75112 727 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR7C1O76099 320 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 KLK1P06870 262 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 C8orf88P0DMB2 117 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 HLA-DOBP13765 273 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 FUT1P19526 365 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 PEBP1P30086 187 aaKnown RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 FUT6P51993 359 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 FOXI1Q12951 378 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 KLF5Q13887 457 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM187Q14656 261 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 MRPL23Q16540 153 aaKnown RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q56UQ5 140 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM69BQ5VUD6 431 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SPATA31B1PQ5VZV4 182 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 C9orf57Q5W0N0 161 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 ASCL4Q6XD76 172 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF550Q7Z398 422 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM25Q86YD3 366 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR6K6Q8NGW6 343 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 C16orf52Q8NHV5 167 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TSKUQ8WUA8 353 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM255BQ8WV15 326 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF480Q8WV37 535 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 DAZLQ92904 295 aaKnown RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC25A44Q96H78 314 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 C4orf45Q96LM5 186 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 TNFRSF13CQ96RJ3 184 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SDF2Q99470 211 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 CDX2Q99626 313 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 SPAG8Q99932 426 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 CHRNA10Q9GZZ6 450 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 IFI27L2Q9H2X8 130 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 ENY2Q9NPA8 101 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 DMRT3Q9NQL9 472 aa4.03□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF331Q9NQX6 463 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms