RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 A0A1W2PNR3 127 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 C11orf98E9PRG8 122 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 C16orf97H3BN30 126 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 MPIG6BO95866 241 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 HRASP01112 189 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 OR10J4P0C629 311 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 RPS10P46783 165 aaKnown RBP6.17□□□□□ -1.42
CLIP1-205ENST00000514271 CEBPGP53567 150 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 CLDN17P56750 224 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 TDRG1Q3Y452 100 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 FAM27BQ5VT28 67 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 CSNK2A3Q8NEV1 391 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 STXBP6Q8NFX7 210 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 URM1Q9BTM9 101 aaKnown RBP6.17□□□□□ -1.42
CLIP1-205ENST00000514271 C1QTNF5Q9BXJ0 243 aa6.17□□□□□ -1.42
CLIP1-205ENST00000514271 WDR61Q9GZS3 305 aaKnown RBP6.17□□□□□ -1.42
CLIP1-205ENST00000514271 SHISA8B8ZZ34 492 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 XRCC2O43543 280 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 COX6B1P14854 86 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 TSPO2Q5TGU0 170 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 CARD17Q5XLA6 110 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 C20orf204Q6ZNR8 217 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 OR4F17Q8NGA8 305 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 OR4F4Q96R69 305 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 NAT8Q9UHE5 227 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 PRSS50Q9UI38 385 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 TSTD3H0UI37 97 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 ZNF728P0DKX0 622 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 BLVRBP30043 206 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 CEACAM3P40198 252 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 POU3F1Q03052 451 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 TFF3Q07654 80 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 TESK1Q15569 626 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 TMEM41BQ5BJD5 291 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 BATF2Q8N1L9 274 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 FAM110AQ9BQ89 295 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 FAAP24Q9BTP7 215 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 ELOVL1Q9BW60 279 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 MRPL27Q9P0M9 148 aaKnown RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 VDAC1P21796 283 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 GUCA1AP43080 201 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 RPS20P60866 119 aaKnown RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 PCBD1P61457 104 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 RUNX1Q01196 453 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 ZNF718Q3SXZ3 478 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 SP6Q3SY56 376 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 C16orf82Q7Z2V1 217 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 OR5C1Q8NGR4 320 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 MRPL30Q8TCC3 161 aaKnown RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 S100PBPQ96BU1 408 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 C14orf166Q9Y224 244 aaKnown RBP6.16□□□□□ -1.42
CLIP1-205ENST00000514271 TNFRSF18Q9Y5U5 241 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 HCFC1P51610 2035 aa6.16□□□□□ -1.42
CLIP1-205ENST00000514271 HBE1P02100 147 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 BIDP55957 195 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 RPS16P62249 146 aaKnown RBP6.15□□□□□ -1.42
CLIP1-205ENST00000514271 RHOGP84095 191 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 ACSM6Q6P461 480 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 LINC01551Q86U37 167 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 TBC1D26Q86UD7 250 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 CNEP1R1Q8N9A8 125 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 DYRK2Q92630 601 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 SNX22Q96L94 193 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 SRSF8Q9BRL6 282 aaKnown RBP6.15□□□□□ -1.42
CLIP1-205ENST00000514271 EIF5A2Q9GZV4 153 aaKnown RBP6.15□□□□□ -1.42
CLIP1-205ENST00000514271 C1RLQ9NZP8 487 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 LY96Q9Y6Y9 160 aa6.15□□□□□ -1.42
CLIP1-205ENST00000514271 CDAP32320 146 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 ARR3P36575 388 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 RBMXP38159 391 aaKnown RBP6.15□□□□□ -1.43
CLIP1-205ENST00000514271 S100A10P60903 97 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 UBE2KP61086 200 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 MRPS34P82930 218 aaKnown RBP6.15□□□□□ -1.43
CLIP1-205ENST00000514271 TAF9Q16594 264 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 FAM120AOSQ5T036 256 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 PLCXD3Q63HM9 321 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 FAM213BQ8TBF2 198 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 MIEN1Q9BRT3 115 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 NIPSNAP3BQ9BS92 247 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 ST6GALNAC5Q9BVH7 336 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 SMIM3Q9BZL3 60 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 PRO1933Q9H354 126 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 RBKSQ9H477 322 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 MBNL3Q9NUK0 354 aaKnown RBP6.15□□□□□ -1.43
CLIP1-205ENST00000514271 HSPB7Q9UBY9 170 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 CELSR3Q9NYQ7 3312 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 DCHS1Q96JQ0 3298 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 FAM90A26D6RGX4 464 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 CRXO43186 299 aaPredicted RBP6.15□□□□□ -1.43
CLIP1-205ENST00000514271 PGLYRP1O75594 196 aaPredicted RBP6.15□□□□□ -1.43
CLIP1-205ENST00000514271 S100A2P29034 98 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 ID1P41134 155 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 PSG7Q13046 419 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 ERASQ7Z444 233 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 MRPL41Q8IXM3 137 aaKnown RBP6.15□□□□□ -1.43
CLIP1-205ENST00000514271 NEK7Q8TDX7 302 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 TECTBQ96PL2 329 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 ZNF665Q9H7R5 613 aa6.15□□□□□ -1.43
CLIP1-205ENST00000514271 LSM5Q9Y4Y9 91 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms