RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 REPIN1Q9BWE0 567 aaKnown RBP3.59□□□□□ -1.83
VCAN-209ENST00000513016 ALX4Q9H161 411 aaPredicted RBP3.59□□□□□ -1.83
VCAN-209ENST00000513016 OR51M1Q9H341 326 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 TBL2Q9Y4P3 447 aaKnown RBP3.59□□□□□ -1.83
VCAN-209ENST00000513016 TMSB15BA0A087X1C1 80 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 IL6RP08887 468 aaPredicted RBP3.59□□□□□ -1.83
VCAN-209ENST00000513016 OR9G9P0C7N8 305 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 HDHD3Q9BSH5 251 aaPredicted RBP3.59□□□□□ -1.83
VCAN-209ENST00000513016 MYO10Q9HD67 2058 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 A0A0G2JMM0 328 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 A0A1W2PPB8 328 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 A0A1W2PRS3 328 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 KIR3DP1A8MWS1 328 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 PAGE4O60829 102 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 NR2C2APQ86WQ0 139 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 MDS2Q8NDY4 140 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 TMEM190Q8WZ59 177 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 DYRK2Q92630 601 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 C1QTNF4Q9BXJ3 329 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 TMEM222Q9H0R3 208 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 ALX3O95076 343 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 GCGP01275 180 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 IL4P05112 153 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 CD99P14209 185 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 ZNF56Q15929 161 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 TMEM155Q4W5P6 130 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 NCMAPQ5T1S8 102 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 CLEC19AQ6UXS0 136 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 Q6ZNX1 250 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 FAM169BQ8N8A8 192 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 C2CD4CQ8TF44 421 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 SLC50A1Q9BRV3 221 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 DPH3P1Q9H4G8 78 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 A0A0G2JNJ9 132 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 M0R3E3 92 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 EREGO14944 169 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 SAP30O75446 220 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 ASIPP42127 132 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 IGSF11Q5DX21 431 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 MBNL2Q5VZF2 373 aaKnown RBP3.59□□□□□ -1.84
VCAN-209ENST00000513016 ZNF600Q6ZNG1 722 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 WBP1Q96G27 269 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 KIR2DL4Q99706 377 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 SRD5A3Q9H8P0 318 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 DCAF16Q9NXF7 216 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 Q9UFV3 132 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 NRXN2Q9P2S2 1712 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 TRBV5-7A0A0A0MS05 114 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 NPIPB9F8W1W9 429 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 ICMTO60725 284 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 GGCTO75223 188 aaKnown RBP3.59□□□□□ -1.84
VCAN-209ENST00000513016 F12P00748 615 aaPredicted RBP3.59□□□□□ -1.84
VCAN-209ENST00000513016 CSRP3P50461 194 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 HIST1H3AP68431 136 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 FUT5Q11128 374 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 IQCJQ1A5X6 159 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 PLA2G2CQ5R387 149 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 CYP2G1PQ6ZSU1 146 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 RELL2Q8NC24 303 aaPredicted RBP3.59□□□□□ -1.84
VCAN-209ENST00000513016 GPR146Q96CH1 333 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 MRAP2Q96G30 205 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 GGACTQ9BVM4 153 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 GEMIN7Q9H840 131 aaKnown RBP3.59□□□□□ -1.84
VCAN-209ENST00000513016 SCN10AQ9Y5Y9 1956 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 TRPM7Q96QT4 1865 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 CBY3A6NI87 242 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 A6NNC1 897 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 MARCH11A6NNE9 402 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 YPEL1O60688 119 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 STAG3L2P0CL84 134 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 UNC119Q13432 240 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 CLEC9AQ6UXN8 241 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 CACNG8Q8WXS5 425 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 NPIPB3Q92617 1050 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 YPEL2Q96QA6 119 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 AKIP1Q9NQ31 210 aa3.59□□□□□ -1.84
VCAN-209ENST00000513016 CGB1A6NKQ9 187 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 IGHV1-46P01743 117 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 HKR1P10072 659 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 ZNF660Q6AZW8 331 aaPredicted RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 PET117Q6UWS5 81 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 IGFL3Q6UXB1 125 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 H1FOOQ8IZA3 346 aaPredicted RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 MAP1LC3AQ9H492 121 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SMDT1Q9H4I9 107 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 C4orf51C9J302 202 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 TCF21O43680 179 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 FABP4P15090 132 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 GPR183P32249 361 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SULT1A2P50226 295 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 PVRIGQ6DKI7 326 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 C8orf82Q6P1X6 216 aaPredicted RBP3.58□□□□□ -1.84
VCAN-209ENST00000513016 DHRS11Q6UWP2 260 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 LEAP2Q969E1 77 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 RSG1Q9BU20 258 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 IFI27L2Q9H2X8 130 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SIGLEC5O15389 551 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 SPINK4O60575 86 aa3.58□□□□□ -1.84
VCAN-209ENST00000513016 IGKV3-20P01619 116 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms