RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 KIAA0087Q14695 138 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 MAPK14Q16539 360 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 DEFB135Q30KP9 77 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 C8orf74Q6P047 294 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF621Q6ZSS3 439 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 SLC35E3Q7Z769 313 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 LINC00596Q86U02 117 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 LRRC8AQ8IWT6 810 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 KIR2DL5AQ8N109 375 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 SYS1Q8N2H4 156 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 COX18Q8N8Q8 333 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 CDRT4Q8N9R6 151 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 OR6K6Q8NGW6 343 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 OR6N2Q8NGY6 317 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 OR13G1Q8NGZ3 307 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 OR2G3Q8NGZ4 309 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 KIR2DL5BQ8NHK3 375 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF502Q8TBZ5 544 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM239Q8WW34 195 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 CACNG8Q8WXS5 425 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 MRGPRFQ96AM1 343 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 RNF170Q96K19 258 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 KIFC1Q9BW19 673 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 PRRG3Q9BZD7 231 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 SYT4Q9H2B2 425 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 C11orf68Q9H3H3 251 aaKnown RBP2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 ARMC7Q9H6L4 198 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 MCUBQ9NWR8 336 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 SLC25A37Q9NYZ2 338 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 LINC00527Q9UJ94 153 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 ING4Q9UNL4 249 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 WSB1Q9Y6I7 421 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 HSPE1-MOB4S4R3N1 261 aa2.19□□□□□ -2.06
TOPBP1-208ENST00000511439 LOC102724200A0A096LPH7 203 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 TRAV10A0A0B4J240 114 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 TMEM72A0PK05 275 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 OR11H12B2RN74 326 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 F5H5P2 479 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 I3L521 148 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 XKRYO14609 159 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CRTAPO75718 401 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 FADS2O95864 444 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CST4P01036 141 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 IFI6P09912 130 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 ACSM4P0C7M7 580 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CT45A6P0DMU7 189 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CT45A5P0DMU8 189 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CT45A7P0DMV0 189 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 IGHV1-8P0DP01 117 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 NQO2P16083 231 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 RPS4Y1P22090 263 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 HTR2CP28335 458 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 BRS3P32247 399 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 AQP2P41181 271 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 POLR2HP52434 150 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CRISP1P54107 249 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CDKN2DP55273 166 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 TAS2R60P59551 318 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF92Q03936 586 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CLINT1Q14677 625 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 C5orf64Q2M2E5 130 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CT45A1Q5HYN5 189 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CLEC12AQ5QGZ9 265 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 ZNF678Q5SXM1 525 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CCNJQ5T5M9 372 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 TIFABQ6ZNK6 161 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 COMMD6Q7Z4G1 85 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 C6orf120Q7Z4R8 191 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 C20orf196Q8IYI0 205 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 PUSL1Q8N0Z8 303 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 SLC22A24Q8N4F4 322 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 FAM216BQ8N7L0 139 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 LINC00469Q8N7U9 141 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 NOXO1Q8NFA2 376 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 OR52L1Q8NGH7 329 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 OR51G1Q8NGK1 321 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 OR6N1Q8NGY5 312 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 CT45A3Q8NHU0 189 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 LGALS14Q8TCE9 139 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 TM4SF18Q96CE8 201 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 SEH1LQ96EE3 360 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 FAM210BQ96KR6 192 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 UBE2E2Q96LR5 201 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 RARRES2Q99969 163 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 MAP1LC3CQ9BXW4 147 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 WFDC10AQ9H1F0 79 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 PLEKHA1Q9HB21 404 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 RCL1Q9Y2P8 373 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 HYOU1Q9Y4L1 999 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 ATP6V1DQ9Y5K8 247 aa2.18□□□□□ -2.06
TOPBP1-208ENST00000511439 PRSS37A4D1T9 235 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 TRPC5OSA6NMA1 111 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 ODF3BA8MYP8 253 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 H3BN98 237 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 PEX7O00628 323 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 GATCO43716 136 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 FKBP6O75344 327 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 MPDU1O75352 247 aa2.17□□□□□ -2.06
TOPBP1-208ENST00000511439 NDUFB2O95178 105 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms