RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CD36P16671 472 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 IL3RAP26951 378 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 CD1BP29016 333 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 PSMD7P51665 324 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 LSM3P62310 102 aaKnown RBP3.55□□□□□ -1.84
NUP54-206ENST00000508465 HTD2P86397 168 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 EBI3Q14213 229 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 HMGN3Q15651 99 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 C2orf68Q2NKX9 166 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 IGSF11Q5DX21 431 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 TRAT1Q6PIZ9 186 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 GLDNQ6ZMI3 551 aaPredicted RBP3.55□□□□□ -1.84
NUP54-206ENST00000508465 Q8N6K4 173 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 C5orf56Q8N8D9 126 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 C8orf31Q8N9H6 132 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 Q8N9W7 124 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 OR2AK2Q8NG84 335 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 OR56B1Q8NGI3 324 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 OR10R2Q8NGX6 335 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 RAB3CQ96E17 227 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 AKR1E2Q96JD6 320 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 YPEL2Q96QA6 119 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 CLCC1Q96S66 551 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 S1PR3Q99500 378 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 RASL11BQ9BPW5 248 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 NABP2Q9BQ15 211 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 CMSS1Q9BQ75 279 aaKnown RBP3.55□□□□□ -1.84
NUP54-206ENST00000508465 ABHD14AQ9BUJ0 271 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 ST6GALNAC5Q9BVH7 336 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 MMP27Q9H306 513 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 SCPEP1Q9HB40 452 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 RAB9BQ9NP90 201 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 HSPB7Q9UBY9 170 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 STUB1Q9UNE7 303 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 SSR3Q9UNL2 185 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 WSB1Q9Y6I7 421 aa3.55□□□□□ -1.84
NUP54-206ENST00000508465 TET2Q6N021 2002 aaPredicted RBP3.54□□□□□ -1.84
NUP54-206ENST00000508465 TRAV18A0A075B6X5 111 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 IGKV1D-8A0A087WSZ0 117 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 SAA2-SAA4A0A096LPE2 208 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 TRBV6-6A0A0A6YYG2 114 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 PSMB11A5LHX3 300 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 H7C2Y5 167 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 M0QZK8 103 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 MRPS14O60783 128 aaKnown RBP3.54□□□□□ -1.84
NUP54-206ENST00000508465 RGS11O94810 467 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 OPN1MWP04001 364 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 FCGR3AP08637 254 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 OR8U9P0C7N5 309 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 SAA2P0DJI9 122 aaPredicted RBP3.54□□□□□ -1.84
NUP54-206ENST00000508465 CT45A6P0DMU7 189 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 CT45A5P0DMU8 189 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 CT45A7P0DMV0 189 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 OPN1MW2P0DN77 364 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 OPN1MW3P0DN78 364 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 PTHLHP12272 177 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 IGLL1P15814 213 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 GALP22466 123 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 FGF9P31371 208 aaPredicted RBP3.54□□□□□ -1.84
NUP54-206ENST00000508465 TALDO1P37837 337 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 GPR12P47775 334 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 MFAP4P55083 255 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 ACTBP60709 375 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 HLA-DRB3P79483 266 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 ARFRP1Q13795 201 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 IDNKQ5T6J7 187 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 ASPHD1Q5U4P2 390 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 FAM131AQ6UXB0 335 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 ZNF833PQ6ZTB9 187 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 SLC35E3Q7Z769 313 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 NDUFA11Q86Y39 141 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 TSPAN14Q8NG11 270 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 OR5H6Q8NGV6 325 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 OR8U1Q8NH10 309 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 C2CD4CQ8TF44 421 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 FCGR1BQ92637 280 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 KCTD7Q96MP8 289 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 DUX3Q96PT4 197 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 HSPB9Q9BQS6 159 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 ZNF251Q9BRH9 671 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 C1QTNF4Q9BXJ3 329 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 IFI27L2Q9H2X8 130 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 RIMS4Q9H426 269 aaPredicted RBP3.54□□□□□ -1.84
NUP54-206ENST00000508465 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 C12orf4Q9NQ89 552 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.54□□□□□ -1.84
NUP54-206ENST00000508465 JPT1Q9UK76 154 aa3.54□□□□□ -1.84
NUP54-206ENST00000508465 A0A087WXM4 84 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 METTL21EPA6NDL7 271 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 TMEM235A6NFC5 223 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 A8MZ25 164 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 G3V318 75 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 M0R1X1 148 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 MFNGO00587 321 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 RAB29O14966 203 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 FABP7O15540 132 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 FGF16O43320 207 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 SSX5O60225 188 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 PAGE4O60829 102 aa3.53□□□□□ -1.84
NUP54-206ENST00000508465 OR2C1O95371 312 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms