RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 MMD2Q8IY49 270 aa13.45□□□□□ -0.26
CLDND1-217ENST00000508071 MND1Q9BWT6 205 aa13.45□□□□□ -0.26
CLDND1-217ENST00000508071 KLK5Q9Y337 293 aaPredicted RBP13.45□□□□□ -0.26
CLDND1-217ENST00000508071 DMRT1Q9Y5R6 373 aa13.45□□□□□ -0.26
CLDND1-217ENST00000508071 ZNF320A2RRD8 509 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 SAA1P0DJI8 122 aaPredicted RBP13.44□□□□□ -0.26
CLDND1-217ENST00000508071 ARL3P36405 182 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 CDK10Q15131 360 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 FAM106AQ4KMX7 169 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 RPP25LQ8N5L8 163 aaKnown RBP13.44□□□□□ -0.26
CLDND1-217ENST00000508071 BPIFB6Q8NFQ5 453 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 GINS4Q9BRT9 223 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 PLCXD1Q9NUJ7 323 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 FBXL7Q9UJT9 491 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 ZNF257Q9Y2Q1 563 aa13.44□□□□□ -0.26
CLDND1-217ENST00000508071 LINC00473A8K010 186 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 SCAF4O95104 1147 aaKnown RBP13.43□□□□□ -0.26
CLDND1-217ENST00000508071 DIRAS3O95661 229 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 IGHV3-23P01764 117 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 FCGR3AP08637 254 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 TNFRSF9Q07011 255 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 LAIR2Q6ISS4 152 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 LYG2Q86SG7 212 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 WFDC3Q8IUB2 231 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 C8orf59Q8N0T1 100 aaPredicted RBP13.43□□□□□ -0.26
CLDND1-217ENST00000508071 GFI1Q99684 422 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 DCUN1D5Q9BTE7 237 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 MLXQ9UH92 298 aa13.43□□□□□ -0.26
CLDND1-217ENST00000508071 TMEM213A2RRL7 107 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 DPPA5A6NC42 116 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 HMX3A6NHT5 357 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 CDK1P06493 297 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 BMI1P35226 326 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 CLDN12P56749 244 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 EWSR1Q01844 656 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLDND1-217ENST00000508071 TM4SF20Q53R12 229 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 OR4A47Q6IF82 309 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 CLEC19AQ6UXS0 136 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 UXS1Q8NBZ7 420 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 TP53TG1Q9Y2A0 90 aa13.42□□□□□ -0.26
CLDND1-217ENST00000508071 AK6Q9Y3D8 172 aaKnown RBP13.42□□□□□ -0.26
CLDND1-217ENST00000508071 NPIPB5A8MRT5 1133 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 A8MWP6 167 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 DENRO43583 198 aaKnown RBP13.41□□□□□ -0.26
CLDND1-217ENST00000508071 SPRY2O43597 315 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 FCGR3BO75015 233 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 GNAO1P09471 354 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 RANBP1P43487 201 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 APOC4P55056 127 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 BTNL8Q6UX41 500 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 PACRGLQ8N7B6 248 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 MAFIPQ8WZ33 124 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 TMEM203Q969S6 136 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 FAM3DQ96BQ1 224 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 RAB3CQ96E17 227 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 CCDC140Q96MF4 163 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 C8orf4Q9NR00 106 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 FKBP14Q9NWM8 211 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 KCNK7Q9Y2U2 307 aa13.41□□□□□ -0.26
CLDND1-217ENST00000508071 SPHARQ15513 63 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.26
CLDND1-217ENST00000508071 C19orf35Q6ZS72 473 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 Q6ZWC4 215 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 OR1L6Q8NGR2 347 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 UFD1Q92890 307 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 EEF1AKMT3Q96AZ1 226 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 CENPOQ9BU64 300 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 S4R3C0 116 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 PCLOQ9Y6V0 5065 aa13.4□□□□□ -0.26
CLDND1-217ENST00000508071 TRAV25A0A0B4J276 109 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 TEX22C9J3V5 150 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 DHFRP00374 187 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 ATF4P18848 351 aaPredicted RBP13.39□□□□□ -0.27
CLDND1-217ENST00000508071 MED22Q15528 200 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 DEFB135Q30KP9 77 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 LIPKQ5VXJ0 399 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 H1FOOQ8IZA3 346 aaPredicted RBP13.39□□□□□ -0.27
CLDND1-217ENST00000508071 SLC38A6Q8IZM9 456 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 TMEM217Q8N7C4 229 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 FBLIM1Q8WUP2 373 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 FYTTD1Q96QD9 318 aaKnown RBP13.39□□□□□ -0.27
CLDND1-217ENST00000508071 OR51E2Q9H255 320 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 RAB22AQ9UL26 194 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 MRPS7Q9Y2R9 242 aaKnown RBP13.39□□□□□ -0.27
CLDND1-217ENST00000508071 PRELID3BQ9Y3B1 194 aa13.39□□□□□ -0.27
CLDND1-217ENST00000508071 TMEM272A0A1B0GTI8 110 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 ERICH4A6NGS2 130 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 DEDDO75618 318 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 ARL6IP5O75915 188 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 RPL27AP46776 148 aaKnown RBP13.38□□□□□ -0.27
CLDND1-217ENST00000508071 OR2B11Q5JQS5 317 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 KCTD9Q7L273 389 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 VKORC1L1Q8N0U8 176 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 VSTM2AQ8TAG5 236 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 SLC2A9Q9NRM0 540 aa13.38□□□□□ -0.27
CLDND1-217ENST00000508071 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
CLDND1-217ENST00000508071 HECTD4Q9Y4D8 3996 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms