RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ACBD4Q8NC06 268 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM104Q8NE00 496 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR8G5Q8NG78 346 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR56B2PQ8NGI1 322 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5H2Q8NGV7 314 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR4K15Q8NH41 348 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR2AE1Q8NHA4 323 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LILRB4Q8NHJ6 448 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TERB2Q8NHR7 220 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LINC01006Q8NI28 216 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC25A40Q8TBP6 338 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZFAND1Q8TCF1 268 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KLF14Q8TD94 323 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CA5BP1Q8WTZ4 195 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RNASE6Q93091 150 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 S100PBPQ96BU1 408 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 UPRTQ96BW1 309 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 HYLS1Q96M11 299 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF75AQ96N20 296 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 CMSS1Q9BQ75 279 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 GINS4Q9BRT9 223 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR2J1Q9GZK6 312 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LPAR5Q9H1C0 372 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 C20orf85Q9H1P6 137 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 MED28Q9H204 178 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51I2Q9H344 312 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 BANF2Q9H503 90 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 PRORYQ9H606 182 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RANBP3Q9H6Z4 567 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF442Q9H7R0 627 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF702PQ9H963 129 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 NOX3Q9HBY0 568 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 HRASLSQ9HDD0 168 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 MYOZ1Q9NP98 299 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KCNJ16Q9NPI9 418 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 C12orf4Q9NQ89 552 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ASF1BQ9NVP2 202 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 NECAP2Q9NVZ3 263 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TREM2Q9NZC2 230 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KCNIP1Q9NZI2 227 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 MYEF2Q9P2K5 600 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 DPM3Q9P2X0 92 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF221Q9UK13 617 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 TBC1D24Q9ULP9 559 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 KCNIP3Q9Y2W7 256 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 MEMO1Q9Y316 297 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 STARD10Q9Y365 291 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RHBDD3Q9Y3P4 386 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM215AQ9Y5M1 114 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC25A15Q9Y619 301 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 COL27A1Q8IZC6 1860 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 RALGAPA1Q6GYQ0 2036 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 NUP214P35658 2090 aaPredicted RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 SNRNP200O75643 2136 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 UNC13CQ8NB66 2214 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 HELZ2Q9BYK8 2649 aaKnown RBP1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 WDFY4Q6ZS81 3184 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 DNAH14Q0VDD8 3507 aa1.79□□□□□ -2.12
TOPBP1-205ENST00000506779 LAMA1P25391 3075 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 RP1P56715 2156 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TRAV6A0A075B6T7 132 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TRBV6-6A0A0A6YYG2 114 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 IGHV2OR16-5A0A0B4J2B6 119 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 IGHV1-18A0A0C4DH31 117 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A1B0GVG6 124 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A1B0GWJ7 208 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 C7orf66A4D0T2 115 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM235A6NFC5 223 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TUBAL3A6NHL2 446 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CEACAM18A8MTB9 384 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TRDCB7Z8K6 153 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 K7EM74 188 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 M0R1B8 84 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 MFNGO00587 321 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CDIPTO14735 213 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 GEMIN2O14893 280 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SOCS1O15524 211 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 NDUFA2O43678 99 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC22A5O76082 557 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 MT-ND4P03905 459 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CD74P04233 296 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CD3DP04234 171 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PET100P0DJ07 73 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5H8P0DN80 308 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF44P15621 663 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 GZMHP20718 246 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ERP29P30040 261 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CALCRP30988 508 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 HRH1P35367 487 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 GLP1RP43220 463 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 EIF2B2P49770 351 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF83P51522 516 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CCR6P51684 374 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 EGFEM1PQ0D2K5 195 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PSG7Q13046 419 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 EXOSC2Q13868 293 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 MPPED2Q15777 294 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TAF9Q16594 264 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms