RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 WDR1O75083 606 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF324O75467 553 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-208ENST00000506368 TRAPPC6AO75865 159 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 RHOBP62745 196 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 TLE1Q04724 770 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 SLC23A3Q6PIS1 610 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 IL1F10Q8WWZ1 152 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 MRPL27Q9P0M9 148 aaKnown RBP13.34□□□□□ -0.27
SCLT1-208ENST00000506368 OR1A1Q9P1Q5 309 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 MPC1Q9Y5U8 109 aa13.34□□□□□ -0.27
SCLT1-208ENST00000506368 TRBV20OR9-2A0A075B6H5 130 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 ZNF716A6NP11 495 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 CLDN14O95500 239 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 HLA-DQA1P01909 254 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 TNFSF4P23510 183 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 TSPOP30536 169 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 CEACAM16Q2WEN9 425 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 HLA-BQ31612 363 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 KRTCAP3Q53RY4 240 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 MMD2Q8IY49 270 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 CPEB3Q8NE35 698 aaKnown RBP13.33□□□□□ -0.27
SCLT1-208ENST00000506368 CORO2AQ92828 525 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 BORCS7Q96B45 105 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 GNB4Q9HAV0 340 aa13.33□□□□□ -0.27
SCLT1-208ENST00000506368 DCHS1Q96JQ0 3298 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 ODAMA1E959 279 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 CDIPTO14735 213 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 AREGP15514 252 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 HNF1AP20823 631 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 IER3P46695 156 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 CX3CL1P78423 397 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 AARDQ4LEZ3 155 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 GCNT2Q8N0V5 402 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 Q8N7P7 452 aa13.33□□□□□ -0.28
SCLT1-208ENST00000506368 FGF23Q9GZV9 251 aaPredicted RBP13.33□□□□□ -0.28
SCLT1-208ENST00000506368 MBNL3Q9NUK0 354 aaKnown RBP13.33□□□□□ -0.28
SCLT1-208ENST00000506368 GDF9O60383 454 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 WISP2O76076 250 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 FBLN7Q53RD9 439 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 Q8IYB0 196 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 BATF2Q8N1L9 274 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 OR4C5Q8NGB2 326 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 ALKBH3Q96Q83 286 aaPredicted RBP13.32□□□□□ -0.28
SCLT1-208ENST00000506368 SRXN1Q9BYN0 137 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 CLN8Q9UBY8 286 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 SEC16AO15027 2179 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 ASCC3Q8N3C0 2202 aaKnown RBP13.32□□□□□ -0.28
SCLT1-208ENST00000506368 GNG3P63215 75 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 ZNF718Q3SXZ3 478 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 STUMQ69YW2 141 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 RASL11AQ6T310 242 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 ZNF497Q6ZNH5 498 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 MYPOPQ86VE0 399 aaPredicted RBP13.32□□□□□ -0.28
SCLT1-208ENST00000506368 RPS19BP1Q86WX3 136 aaKnown RBP13.32□□□□□ -0.28
SCLT1-208ENST00000506368 MCEMP1Q8IX19 187 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 HS3ST6Q96QI5 342 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 TAAR6Q96RI8 345 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 IL36RNQ9UBH0 155 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
SCLT1-208ENST00000506368 FAM186AA6NE01 2351 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 A0A1W2PS18 150 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 FAM90A9PA6NNJ1 464 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 ZG16O60844 167 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 SS18L1O75177 396 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-208ENST00000506368 NXPH2O95156 264 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 PATE4P0C8F1 98 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 EGR1P18146 543 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 OR4P4Q8NGL7 312 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 TMEM45BQ96B21 275 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
SCLT1-208ENST00000506368 TUBG2Q9NRH3 451 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 OSTCQ9NRP0 149 aa13.31□□□□□ -0.28
SCLT1-208ENST00000506368 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 G3V3Y1 287 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 RAC2P15153 192 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 SRD5A2P31213 254 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 FOXL2P58012 376 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 LYG1Q8N1E2 194 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 SLC24A4Q8NFF2 622 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 FAM103A1Q9BTL3 118 aaKnown RBP13.3□□□□□ -0.28
SCLT1-208ENST00000506368 TRAPPC2LQ9UL33 140 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 V9GYV3 84 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 LOC105371242A0A075B767 164 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 SCO2A0A1W2PP80 73 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 PGPEP1LA6NFU8 196 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 SYNGR1O43759 233 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 C3orf79P0CE67 100 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 ARL14EPLP0DKL9 152 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 CARD18P57730 90 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 RHOGP84095 191 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 H2BFWTQ7Z2G1 175 aa13.3□□□□□ -0.28
SCLT1-208ENST00000506368 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
SCLT1-208ENST00000506368 IGLC7A0M8Q6 106 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 ANKRD30BLA7E2S9 258 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 AQP7O14520 342 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 CDX4O14627 284 aaPredicted RBP13.29□□□□□ -0.28
SCLT1-208ENST00000506368 SCRG1O75711 98 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms