RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ZNF616Q08AN1 781 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 ASAH1Q13510 395 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 EIF4EBP1Q13541 118 aaPredicted RBP10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 C9orf66Q5T8R8 295 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 PPP1R27Q86WC6 154 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 LFNGQ8NES3 379 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 OR1N2Q8NGR9 330 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 SLC25A38Q96DW6 304 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 RHOVQ96L33 236 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 OR5B12Q96R08 314 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 SLC35D1Q9NTN3 355 aa10.8□□□□□ -0.68
PDLIM7-211ENST00000504318 A0A0A6YYH2 397 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 METTL21EPA6NDL7 271 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 A6NJ64 397 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 SEC14L6B5MCN3 397 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 SLC25A17O43808 307 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 LGALS1P09382 135 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 OR8U8P0C7N1 319 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 RPS16P62249 146 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 CDNFQ49AH0 187 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 TMEM69Q5SWH9 247 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 MZT2BQ6NZ67 158 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 TMEM65Q6PI78 240 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 SNX29P2Q8IUI4 249 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 OR10J5Q8NHC4 309 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 DCUN1D4Q92564 292 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 DPF1Q92782 380 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 FLYWCH2Q96CP2 140 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 CLCC1Q96S66 551 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 TSNAXQ99598 290 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 DIABLOQ9NR28 239 aa10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 HUWE1Q7Z6Z7 4374 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 KMT2CQ8NEZ4 4911 aaKnown RBP10.79□□□□□ -0.68
PDLIM7-211ENST00000504318 IGHV4OR15-8A0A075B7B6 117 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 A0A087WW49 117 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 TMEM235A6NFC5 223 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 RAMP3O60896 148 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 BRI3O95415 125 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 APOA2P02652 100 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 SLURP1P55000 103 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 BRWD1-AS2P59051 145 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 BAK1Q16611 211 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 ACTBL2Q562R1 376 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 UNQ5815/PRO19632Q6UWF5 114 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 NUDCD2Q8WVJ2 157 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 DLX4Q92988 240 aaPredicted RBP10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 PRR25Q96S07 402 aa10.78□□□□□ -0.68
PDLIM7-211ENST00000504318 DNAH7Q8WXX0 4024 aa10.77□□□□□ -0.68
PDLIM7-211ENST00000504318 IGKV1D-13A0A0B4J2D9 117 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 XRCC3O43542 346 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 RBMXL2O75526 392 aaKnown RBP10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 IGKV1-13P0DP09 117 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 LGALS7P47929 136 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 FXYD3Q14802 87 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 PLGLAQ15195 96 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 BVESQ8NE79 360 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 TBC1D24Q9ULP9 559 aa10.77□□□□□ -0.69
PDLIM7-211ENST00000504318 A0A1B0GVG6 124 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 LINC01619G3V211 115 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 GABARAPH6UMI1 98 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 TUSC2O75896 110 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 AP3S2P59780 193 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 RPL30P62888 115 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 MRPS15P82914 257 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 TAGLNQ01995 201 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 TMEM267Q0VDI3 215 aaPredicted RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 ARFRP1Q13795 201 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 ARL6IP1Q15041 203 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 VAX1Q5SQQ9 334 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 OVCH2Q7RTZ1 564 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 HARBI1Q96MB7 349 aa10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 C7orf50Q9BRJ6 194 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 THAP7Q9BT49 309 aaPredicted RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 MRPS7Q9Y2R9 242 aaKnown RBP10.76□□□□□ -0.69
PDLIM7-211ENST00000504318 CENPXA8MT69 81 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 H3BUA1 57 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 OVOL1O14753 267 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 NFYAP23511 347 aaPredicted RBP10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ECI1P42126 302 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 INSL3P51460 131 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 TAS2R20P59543 309 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ZNF57Q68EA5 555 aaPredicted RBP10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ACSM6Q6P461 480 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ZNF645Q8N7E2 425 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 GRPEL2Q8TAA5 225 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ENKURQ8TC29 256 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 FCAMRQ8WWV6 532 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 DEDD2Q8WXF8 326 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 TRIM63Q969Q1 353 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ABHD1Q96SE0 405 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 ST6GALNAC5Q9BVH7 336 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 SLA2Q9H6Q3 261 aa10.75□□□□□ -0.69
PDLIM7-211ENST00000504318 OR2W1Q9Y3N9 320 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms