RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 LSM5Q9Y4Y9 91 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 HSPB11Q9Y547 144 aa6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 USP9YO00507 2555 aaPredicted RBP6.6□□□□□ -1.35
TOPBP1-202ENST00000503338 IGHV1-3A0A0C4DH29 117 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 A0A0G2JRQ6 117 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 TAAR5O14804 337 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 RBMXL2O75526 392 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 S100A11P31949 105 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 BPIFB3P59826 476 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 RPS16P62249 146 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 RPL23AP62750 156 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 EIF5AP63241 154 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 VMA21Q3ZAQ7 101 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 HCP5Q6MZN7 132 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 C1orf229Q6ZS94 237 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 MOB3BQ86TA1 216 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 KCNRGQ8N5I3 272 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 GRPEL2Q8TAA5 225 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 HARBI1Q96MB7 349 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 AQP10Q96PS8 301 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 CLCC1Q96S66 551 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 TBX15Q96SF7 602 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 TSNAXQ99598 290 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 RNF126Q9BV68 326 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 REG4Q9BYZ8 158 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 SLC25A31Q9H0C2 315 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 SLA2Q9H6Q3 261 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 TMEM140Q9NV12 185 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 HSPB7Q9UBY9 170 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 ITGB1BP2Q9UKP3 347 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 AUP1Q9Y679 476 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 WSB1Q9Y6I7 421 aa6.59□□□□□ -1.35
TOPBP1-202ENST00000503338 A0A096LNT2 108 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 KANTRA0A1W2PQU2 76 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 RNASEK-C17orf49H0YIS7 233 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 H0YIZ8 118 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 SYNGR2O43760 224 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 SPDEFO95238 335 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 REG1BP48304 166 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 AP2S1P53680 142 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 SPCS3P61009 180 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 UBE2KP61086 200 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 RPP30P78346 268 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 TNFRSF9Q07011 255 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 BAXQ07812 192 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 HABP2Q14520 560 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 PDLIM3Q53GG5 364 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 LAMTOR1Q6IAA8 161 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 MRPL41Q8IXM3 137 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 TEX29Q8N6K0 151 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 TEX45Q8NA69 505 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 OR5B3Q8NH48 314 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 FOXC2Q99958 501 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 MS4A7Q9GZW8 240 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 ARL6Q9H0F7 186 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 ZC4H2Q9NQZ6 224 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 ZNRD1Q9P1U0 126 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 FOXA2Q9Y261 457 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 RCL1Q9Y2P8 373 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 ZNF257Q9Y2Q1 563 aa6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 HRNRQ86YZ3 2850 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-202ENST00000503338 PTPN13Q12923 2485 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 A0A1W2PPI3 338 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 RNF222A6NCQ9 220 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 C15orf61A6NNL5 157 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 UPK2O00526 184 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 NPFFO15130 113 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 CHST1O43916 411 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 SSSCA1O60232 199 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 TSC22D2O75157 780 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 IFNA17P01571 189 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 IGKV1-16P04430 117 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 IL6RP08887 468 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 CXCL2P19875 107 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 RPL12P30050 165 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 BRS3P32247 399 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 MAS1LP35410 378 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 ATP5IP56385 69 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 LINC00205P59089 165 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 POLR2GP62487 172 aaKnown RBP eCLIP6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 RELBQ01201 579 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 KLRD1Q13241 179 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 OPCMLQ14982 345 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 CXorf66Q5JRM2 361 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 OR4A47Q6IF82 309 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 Q6ZRM9 215 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 TMUB2Q71RG4 321 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 SSX9Q7RTT3 188 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 THNSL2Q86YJ6 484 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 PUSL1Q8N0Z8 303 aaKnown RBP6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 OR2C3Q8N628 320 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 SMIM8Q96KF7 97 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 ARPC5LQ9BPX5 153 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 HIPK2Q9H2X6 1198 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 C7orf69Q9H7B7 122 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 ENY2Q9NPA8 101 aa6.57□□□□□ -1.36
TOPBP1-202ENST00000503338 LYRM2Q9NU23 88 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms